RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 SIX3O95343 332 aaPredicted RBP18.15■□□□□ 0.5
PCDH1-201ENST00000287008 DBTP11182 482 aaKnown RBP18.15■□□□□ 0.5
PCDH1-201ENST00000287008 TCEA1P23193 301 aaKnown RBP18.15■□□□□ 0.5
PCDH1-201ENST00000287008 KHKP50053 298 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 SIM2Q14190 667 aaPredicted RBP18.15■□□□□ 0.5
PCDH1-201ENST00000287008 ZSWIM7Q19AV6 140 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 TNFAIP8L2Q6P589 184 aaPredicted RBP18.15■□□□□ 0.5
PCDH1-201ENST00000287008 KLHL24Q6TFL4 600 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 ERN2Q76MJ5 926 aaKnown RBP18.15■□□□□ 0.5
PCDH1-201ENST00000287008 LRRC70Q7Z2Q7 622 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 ATCAYQ86WG3 371 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 SUN3Q8TAQ9 357 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 IPCEF1Q8WWN9 437 aaPredicted RBP18.15■□□□□ 0.5
PCDH1-201ENST00000287008 LRIG1Q96JA1 1093 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 PRORSD1PA6NEY8 169 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 GPR32O75388 356 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 KLF8O95600 359 aaPredicted RBP18.15■□□□□ 0.5
PCDH1-201ENST00000287008 PIM1P11309 404 aaPredicted RBP18.15■□□□□ 0.5
PCDH1-201ENST00000287008 CASRP41180 1078 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 NR1H2P55055 460 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 C14orf80Q86SX3 495 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 ZNF358Q9NW07 568 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 IGKV6-21A0A0C4DH24 114 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 A0A0D9SEW6 157 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 OAS1P00973 400 aaKnown RBP18.15■□□□□ 0.5
PCDH1-201ENST00000287008 ALOX5P09917 674 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 CRISP3P54108 245 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 HMGCS1Q01581 520 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 ZNF783Q6ZMS7 281 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 OR52J3Q8NH60 311 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 CMTM7Q96FZ5 175 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 IFT80Q9P2H3 777 aaPredicted RBP18.15■□□□□ 0.5
PCDH1-201ENST00000287008 TCRBV7S3A2A0A539 114 aa18.14■□□□□ 0.5
PCDH1-201ENST00000287008 HEPACAM2A8MVW5 462 aa18.14■□□□□ 0.5
PCDH1-201ENST00000287008 PGRMC2O15173 223 aa18.14■□□□□ 0.5
PCDH1-201ENST00000287008 IGFBP5P24593 272 aa18.14■□□□□ 0.5
PCDH1-201ENST00000287008 GRK6P43250 576 aa18.14■□□□□ 0.5
PCDH1-201ENST00000287008 LSM3P62310 102 aaKnown RBP18.14■□□□□ 0.5
PCDH1-201ENST00000287008 TMPRSS11AQ6ZMR5 421 aa18.14■□□□□ 0.5
PCDH1-201ENST00000287008 NATD1Q8N6N6 113 aa18.14■□□□□ 0.5
PCDH1-201ENST00000287008 OR4E2Q8NGC2 313 aa18.14■□□□□ 0.5
PCDH1-201ENST00000287008 RAB7BQ96AH8 199 aa18.14■□□□□ 0.5
PCDH1-201ENST00000287008 TUBGCP5Q96RT8 1024 aa18.14■□□□□ 0.5
PCDH1-201ENST00000287008 FAM83CQ9BQN1 747 aa18.14■□□□□ 0.5
PCDH1-201ENST00000287008 DNAAF2Q9NVR5 837 aaKnown RBP18.14■□□□□ 0.5
PCDH1-201ENST00000287008 ZNF840PA6NDX5 716 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 UGT2B11O75310 529 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 GPIP06744 558 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 NCBP2P52298 156 aaKnown RBP eCLIP18.14■□□□□ 0.49
PCDH1-201ENST00000287008 NUP54Q7Z3B4 507 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 ARL10Q8N8L6 244 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 OR10T2Q8NGX3 314 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 DNAJB8Q8NHS0 232 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 MPP4Q96JB8 637 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 IL1RAPQ9NPH3 570 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 DGKBQ9Y6T7 804 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 RGPD8O14715 1765 aaPredicted RBP18.14■□□□□ 0.49
PCDH1-201ENST00000287008 OLR1P78380 273 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 QPCTQ16769 361 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 RTP2Q5QGT7 225 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 REP15Q6BDI9 236 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 SLC9B2Q86UD5 537 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 ZC3HC1Q86WB0 502 aaKnown RBP18.14■□□□□ 0.49
PCDH1-201ENST00000287008 DCUN1D3Q8IWE4 304 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 HM13Q8TCT9 377 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 SMPDL3BQ92485 455 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 NCSTNQ92542 709 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 TBL1XR1Q9BZK7 514 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 CLEC4MQ9H2X3 399 aaPredicted RBP18.14■□□□□ 0.49
PCDH1-201ENST00000287008 MOCS1Q9NZB8 636 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 SLC2A6Q9UGQ3 507 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 CDH22Q9UJ99 828 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 MCM8Q9UJA3 840 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 PEX12O00623 359 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 DCLK1O15075 740 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 OMPP47874 163 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 CASP9P55211 416 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 IFI44LQ53G44 452 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 FAM81AQ8TBF8 368 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 PSKH2Q96QS6 385 aa18.14■□□□□ 0.49
PCDH1-201ENST00000287008 MAN2B1O00754 1011 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 AHSGP02765 367 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 PTX3P26022 381 aaPredicted RBP18.13■□□□□ 0.49
PCDH1-201ENST00000287008 PRDX6P30041 224 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 CIB1Q99828 191 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 RBM4BQ9BQ04 359 aaKnown RBP18.13■□□□□ 0.49
PCDH1-201ENST00000287008 RBM4Q9BWF3 364 aaKnown RBP18.13■□□□□ 0.49
PCDH1-201ENST00000287008 TMEM98Q9Y2Y6 226 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 KPNA4O00629 521 aaPredicted RBP18.13■□□□□ 0.49
PCDH1-201ENST00000287008 NDUFS4O43181 175 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 KAT7O95251 611 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 CAPGP40121 348 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 STC1P52823 247 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 KCNJ11Q14654 390 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 ZNF805Q5CZA5 627 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 ZDHHC24Q6UX98 284 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 HEATR4Q86WZ0 1026 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 FAM47BQ8NA70 645 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 HCAR2Q8TDS4 363 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 RETREG1Q9H6L5 497 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms