RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 SLC22A17Q8WUG5 538 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 GEMIN6Q8WXD5 167 aaKnown RBP8.58□□□□□ -1.04
NIPBL-201ENST00000282516 NUSAP1Q9BXS6 441 aaKnown RBP8.58□□□□□ -1.04
NIPBL-201ENST00000282516 EDARQ9UNE0 448 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 MAB21L2Q9Y586 359 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 CNTNAP4Q9C0A0 1308 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 A0A1W2PQ67 120 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 OR1F1O43749 312 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 RGS6P49758 472 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 CREB5Q02930 508 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 SNTA1Q13424 505 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 ASB18Q6ZVZ8 466 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 GALNT6Q8NCL4 622 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 LIN37Q96GY3 246 aaPredicted RBP8.58□□□□□ -1.04
NIPBL-201ENST00000282516 RNF157Q96PX1 679 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 TBL1XR1Q9BZK7 514 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 WDR37Q9Y2I8 494 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 HECTD2Q5U5R9 776 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 HFE2Q6ZVN8 426 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 TRABD2AQ86V40 505 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 LPGAT1Q92604 370 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 DUSP16Q9BY84 665 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 C13orf42A0A1B0GVH6 325 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 C9J4A7 227 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 CCRL2O00421 344 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 LGALS2P05162 132 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 LIN52Q52LA3 116 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 TOR1AIP1Q5JTV8 583 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 PRPF38BQ5VTL8 546 aaKnown RBP8.58□□□□□ -1.04
NIPBL-201ENST00000282516 RHBDF2Q6PJF5 856 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 PHF13Q86YI8 300 aaPredicted RBP8.58□□□□□ -1.04
NIPBL-201ENST00000282516 FIBCD1Q8N539 461 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 ELP5Q8TE02 316 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 STRA6Q9BX79 667 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 FAM83DQ9H4H8 585 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 CPA4Q9UI42 421 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 ARID1AO14497 2285 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 H7C417 338 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 PAGE1O75459 146 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 BANF1O75531 89 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 NCBP2P52298 156 aaKnown RBP eCLIP8.58□□□□□ -1.04
NIPBL-201ENST00000282516 SELENOVP59797 346 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 P4HA3Q7Z4N8 544 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 AVL9Q8NBF6 648 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 ACER1Q8TDN7 264 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 UPF1Q92900 1129 aaKnown RBP eCLIP8.58□□□□□ -1.04
NIPBL-201ENST00000282516 AZIN2Q96A70 460 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 GAL3ST1Q99999 423 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 KCNQ5Q9NR82 932 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 TNFRSF10DQ9UBN6 386 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 ZNF318Q5VUA4 2279 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 AGAP5A6NIR3 686 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 hCG_2039718K7EN88 272 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 F8A1P23610 371 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 EPHX2P34913 555 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 NDUFV1P49821 464 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 OR12D2P58182 307 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 DNASE1L3Q13609 305 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 CYP2U1Q7Z449 544 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 LINC00471Q8N535 108 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 MTMR9Q96QG7 549 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 DISP1Q96F81 1524 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 PDHXO00330 501 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 TNFRSF10BO14763 440 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 GLUD1P00367 558 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 HRGP04196 525 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 CXCR1P25024 350 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 HTR2AP28223 471 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 SCNN1GP51170 649 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 TAS2R43P59537 309 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 FAM174BQ3ZCQ3 159 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 PTPN20Q4JDL3 420 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 FAM71AQ8IYT1 594 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 LNX2Q8N448 690 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 TVP23AA6NH52 213 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 GPR89AB7ZAQ6 455 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 GPR89BP0CG08 455 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 RAP2AP10114 183 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 BCKDHAP12694 445 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 IL23RQ5VWK5 629 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 TMED4Q7Z7H5 227 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 NRSN1Q8IZ57 195 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 SLC37A3Q8NCC5 494 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 OR5K1Q8NHB7 308 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 CPT1CQ8TCG5 803 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 S100A16Q96FQ6 103 aaKnown RBP8.57□□□□□ -1.04
NIPBL-201ENST00000282516 EBPLQ9BY08 206 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 OSER1Q9NX31 292 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 KCNS2Q9ULS6 477 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 GJB6O95452 261 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 CCR8P51685 355 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 BPIFB1Q8TDL5 484 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 MECRQ9BV79 373 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 IRF2BPLQ9H1B7 796 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 GBA3Q9H227 469 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 UNKLQ9H9P5 680 aaKnown RBP8.57□□□□□ -1.04
NIPBL-201ENST00000282516 PNPOQ9NVS9 261 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 BICRAQ9NZM4 1560 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 IFNA5P01569 189 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 ALPPL2P10696 532 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms