RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 SUSD1Q6UWL2 747 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.48■■□□□ 1.51
ROM1-201ENST00000278833 GPR149Q86SP6 731 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 CLVS1Q8IUQ0 354 aaPredicted RBP24.48■■□□□ 1.51
ROM1-201ENST00000278833 MICU2Q8IYU8 434 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 OR6K2Q8NGY2 324 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 SCRN2Q96FV2 425 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 TMEM169Q96HH4 297 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 CPPED1Q9BRF8 314 aaPredicted RBP24.48■■□□□ 1.51
ROM1-201ENST00000278833 KCNH6Q9H252 994 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 MRPL17Q9NRX2 175 aaKnown RBP24.48■■□□□ 1.51
ROM1-201ENST00000278833 HELZP42694 1942 aaKnown RBP24.48■■□□□ 1.51
ROM1-201ENST00000278833 NPIPB15A6NHN6 443 aaPredicted RBP24.47■■□□□ 1.51
ROM1-201ENST00000278833 SLC16A5O15375 505 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 NUAK1O60285 661 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 URODP06132 367 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 EPORP19235 508 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 SHHQ15465 462 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 RBM48Q5RL73 367 aaKnown RBP24.47■■□□□ 1.51
ROM1-201ENST00000278833 CRTC1Q6UUV9 634 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 OFCC1Q8IZS5 231 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 GPR26Q8NDV2 337 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 LZICQ8WZA0 190 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 PRO3102Q9H379 93 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 TMED5Q9Y3A6 229 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 A0A1W2PQ67 120 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 NFKBIAP25963 317 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 RPL10P27635 214 aaKnown RBP24.47■■□□□ 1.51
ROM1-201ENST00000278833 GDF5P43026 501 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 GZMMP51124 257 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 EMP3P54852 163 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 SNRPD1P62314 119 aaKnown RBP24.47■■□□□ 1.51
ROM1-201ENST00000278833 ZNF33BQ06732 778 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 TTC23Q5W5X9 447 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 DDX53Q86TM3 631 aaKnown RBP24.47■■□□□ 1.51
ROM1-201ENST00000278833 TESCQ96BS2 214 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 C12orf43Q96C57 262 aaKnown RBP24.47■■□□□ 1.51
ROM1-201ENST00000278833 ZNF689Q96CS4 500 aaPredicted RBP24.47■■□□□ 1.51
ROM1-201ENST00000278833 SLC12A9Q9BXP2 914 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 CPEB1Q9BZB8 566 aaKnown RBP24.47■■□□□ 1.51
ROM1-201ENST00000278833 PAIP1Q9H074 479 aaKnown RBP24.47■■□□□ 1.51
ROM1-201ENST00000278833 KAT8Q9H7Z6 458 aaKnown RBP24.47■■□□□ 1.51
ROM1-201ENST00000278833 CARS2Q9HA77 564 aaKnown RBP24.47■■□□□ 1.51
ROM1-201ENST00000278833 FARSBQ9NSD9 589 aaKnown RBP24.47■■□□□ 1.51
ROM1-201ENST00000278833 NIPSNAP3AQ9UFN0 247 aaPredicted RBP24.47■■□□□ 1.51
ROM1-201ENST00000278833 HS3ST2Q9Y278 367 aa24.47■■□□□ 1.51
ROM1-201ENST00000278833 FFAR3O14843 346 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 GSTA4O15217 222 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 GPR42O15529 346 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 BCKDHAP12694 445 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 MTHFRP42898 656 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 SLC6A12P48065 614 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 HNMTP50135 292 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 HMGCS1Q01581 520 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 DGKKQ5KSL6 1271 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 PRPF38BQ5VTL8 546 aaKnown RBP24.46■■□□□ 1.51
ROM1-201ENST00000278833 TXNDC8Q6A555 127 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 TMEM214Q6NUQ4 689 aaKnown RBP24.46■■□□□ 1.51
ROM1-201ENST00000278833 USP45Q70EL2 814 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 L3MBTL4Q8NA19 623 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 TBC1D20Q96BZ9 403 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 FCRL1Q96LA6 429 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 COPS8Q99627 209 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 OSBPL10Q9BXB5 764 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 PIF1Q9H611 641 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 CXorf21Q9HAI6 301 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 RC3H2Q9HBD1 1191 aaKnown RBP24.46■■□□□ 1.51
ROM1-201ENST00000278833 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.46■■□□□ 1.51
ROM1-201ENST00000278833 CXXC1Q9P0U4 656 aaPredicted RBP24.46■■□□□ 1.51
ROM1-201ENST00000278833 IFT80Q9P2H3 777 aaPredicted RBP24.46■■□□□ 1.51
ROM1-201ENST00000278833 ZNHIT2Q9UHR6 403 aa24.46■■□□□ 1.51
ROM1-201ENST00000278833 TSR3Q9UJK0 312 aaKnown RBP24.46■■□□□ 1.51
ROM1-201ENST00000278833 CXCR6O00574 342 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 SEC22BO75396 215 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 CLIC3O95833 236 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 MT-ND1P03886 318 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 MAPK1P28482 360 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 RPS14P62263 151 aaKnown RBP24.45■■□□□ 1.51
ROM1-201ENST00000278833 PPP2R2BQ00005 443 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 CTBSQ01459 385 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 AAK1Q2M2I8 961 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 LRRC23Q53EV4 343 aaPredicted RBP24.45■■□□□ 1.51
ROM1-201ENST00000278833 ZDHHC13Q8IUH4 622 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 RASGRP3Q8IV61 690 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 OR10A6Q8NH74 314 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 HERVK_113Q902F9 699 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 SDCCAG3Q96C92 435 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 SLC47A1Q96FL8 570 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 ACPTQ9BZG2 426 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 TNKS2Q9H2K2 1166 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 IKZF5Q9H5V7 419 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 DCAF13Q9NV06 445 aaKnown RBP24.45■■□□□ 1.51
ROM1-201ENST00000278833 ADGRE2Q9UHX3 823 aa24.45■■□□□ 1.51
ROM1-201ENST00000278833 INTS6Q9UL03 887 aaKnown RBP24.45■■□□□ 1.51
ROM1-201ENST00000278833 SRCP12931 536 aa24.45■■□□□ 1.5
ROM1-201ENST00000278833 AOAHP28039 575 aa24.45■■□□□ 1.5
ROM1-201ENST00000278833 CREMQ03060 361 aa24.45■■□□□ 1.5
ROM1-201ENST00000278833 RAB39AQ14964 217 aa24.45■■□□□ 1.5
ROM1-201ENST00000278833 PLA2G4EQ3MJ16 856 aa24.45■■□□□ 1.5
ROM1-201ENST00000278833 NEK10Q6ZWH5 1172 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms