RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 FLRT1Q9NZU1 646 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 EIF2B4Q9UI10 523 aaKnown RBP13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 TPST2O60704 377 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 PENKP01210 267 aaPredicted RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 YAP1P46937 504 aaKnown RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 SH3PXD2AQ5TCZ1 1133 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 EPGNQ6UW88 154 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 MAFIPQ8WZ33 124 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 NKD1Q969G9 470 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 ZBED6CLQ96FA7 236 aaPredicted RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 NOCTQ9UK39 431 aaKnown RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 RAI2Q9Y5P3 530 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 FXYD6-FXYD2A0A087WZ82 144 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 PRORSD1PA6NEY8 169 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 M0R233 179 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 DNAJB5O75953 348 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 NPPAP01160 153 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 XRCC1P18887 633 aaPredicted RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 F8A1P23610 371 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 PTPN9P43378 593 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 GBX2P52951 348 aaPredicted RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 NOL9Q5SY16 702 aaKnown RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 TIGD4Q8IY51 512 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 IRGQQ8WZA9 623 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 NCSTNQ92542 709 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 FXYD6Q9H0Q3 95 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 PDPK1O15530 556 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 OR1I1O60431 355 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 GOT2P00505 430 aaKnown RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 GSTM3P21266 225 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 TCEAL6Q6IPX3 200 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 DCAKDQ8WVC6 231 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 TREM1Q9NP99 234 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 SLITRK5O94991 958 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 IL1BP01584 269 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 SMIM10L2AP0DMW4 78 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 SMIM10L2BP0DMW5 78 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 ZNF155Q12901 538 aaPredicted RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 OGFRL1Q5TC84 451 aaPredicted RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 NXPE2Q96DL1 559 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 TBATAQ96M53 351 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 ZNF471Q9BX82 626 aaPredicted RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 KLHL33A6NCF5 533 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 SCAMP3O14828 347 aaKnown RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 KLF1Q13351 362 aaPredicted RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 TUBB3Q13509 450 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 ZNF267Q14586 743 aaPredicted RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 ATXN7L2Q5T6C5 722 aaPredicted RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 APOBEC3HQ6NTF7 200 aaKnown RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 OR10G2Q8NGC3 310 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 CNTN3Q9P232 1028 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 MED31Q9Y3C7 131 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 NID2Q14112 1375 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 PORP16435 677 aaPredicted RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 CPN2P22792 545 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 DNAJB1P25685 340 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 APLP1P51693 650 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 MPP2Q14168 576 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 ERMP1Q7Z2K6 904 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 J3QRK9 145 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 PTGER3P43115 390 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 ZNF627Q7L945 461 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 CIR1Q86X95 450 aaPredicted RBP13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 CANT1Q8WVQ1 401 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 FBXL8Q96CD0 374 aa13.38□□□□□ -0.27
NOTCH1-201ENST00000277541 ZNF208O43345 1280 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 ITGA10O75578 1167 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 FECHP22830 423 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 GRIA2P42262 883 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 WDR4P57081 412 aaKnown RBP13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 SERPINA13PQ6UXR4 307 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 CMTR2Q8IYT2 770 aaKnown RBP13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 DCBLD1Q8N8Z6 715 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 ZNF641Q96N77 438 aaPredicted RBP13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 TRIP11Q15643 1979 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 MATN3O15232 486 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 IMPDH1P20839 514 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 TAF1AQ15573 450 aaPredicted RBP13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 ADGRG6Q86SQ4 1221 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 LINC00471Q8N535 108 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 KXD1Q9BQD3 176 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 KIAA1522Q9P206 1035 aaPredicted RBP13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 MST1RQ04912 1400 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 MSI1O43347 362 aaKnown RBP13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 FAM189A1O60320 539 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 CREB1P16220 341 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 BTBD16Q32M84 506 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 ASB18Q6ZVZ8 466 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 METTL8Q9H825 291 aaKnown RBP13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 DLGAP1O14490 977 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 ESR1P03372 595 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 HDCP19113 662 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 GRM5P41594 1212 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 PIK3CBP42338 1070 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 GANABQ14697 944 aaKnown RBP13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 FAM189A2Q15884 450 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 CDKL4Q5MAI5 379 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 PKP2Q99959 881 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 CPA4Q9UI42 421 aa13.37□□□□□ -0.27
NOTCH1-201ENST00000277541 CNTNAP1P78357 1384 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms