RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 KRT87PA6NCN2 255 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 SDR42E2A6NKP2 422 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 TMEM150CB9EJG8 249 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 FANCGO15287 622 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 HCRTR1O43613 425 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 NIPSNAP2O75323 286 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 KATNA1O75449 491 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 SCRG1O75711 98 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 PKLRP30613 574 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 RPS18P62269 152 aaKnown RBP13.94□□□□□ -0.18
HMGN3-201ENST00000275036 GPS2Q13227 327 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 DHX34Q14147 1143 aaKnown RBP13.94□□□□□ -0.18
HMGN3-201ENST00000275036 KYNUQ16719 465 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 RNASEH2BQ5TBB1 312 aaKnown RBP13.94□□□□□ -0.18
HMGN3-201ENST00000275036 ARMC3Q5W041 872 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 MRNIPQ6NTE8 343 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 ZNF517Q6ZMY9 492 aaPredicted RBP13.94□□□□□ -0.18
HMGN3-201ENST00000275036 CDHR3Q6ZTQ4 885 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 LRRC6Q86X45 466 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 PTRH1Q86Y79 214 aaKnown RBP13.94□□□□□ -0.18
HMGN3-201ENST00000275036 CILP2Q8IUL8 1156 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 TMEM126BQ8IUX1 230 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 SPNS2Q8IVW8 549 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 FAM20CQ8IXL6 584 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 GRK7Q8WTQ7 553 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 ZNF669Q96BR6 464 aaPredicted RBP13.94□□□□□ -0.18
HMGN3-201ENST00000275036 FAM136AQ96C01 138 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 IL17FQ96PD4 163 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 PANX3Q96QZ0 392 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 FAM117AQ9C073 453 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 LATS2Q9NRM7 1088 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 OR6C2Q9NZP2 312 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 RUVBL2Q9Y230 463 aaKnown RBP13.94□□□□□ -0.18
HMGN3-201ENST00000275036 CRYL1Q9Y2S2 319 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 KCNMB2Q9Y691 235 aa13.94□□□□□ -0.18
HMGN3-201ENST00000275036 SETXQ7Z333 2677 aaKnown RBP13.94□□□□□ -0.18
HMGN3-201ENST00000275036 MDC1Q14676 2089 aaKnown RBP13.94□□□□□ -0.18
HMGN3-201ENST00000275036 GOLGA6L10A0A0M3HER8 536 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 K7EM74 188 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 CPNE3O75131 537 aaKnown RBP13.93□□□□□ -0.18
HMGN3-201ENST00000275036 MT-ND3P03897 115 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 CTSBP07858 339 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 CCNYL3P0C7X3 344 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 MSL3P1P0C860 447 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 SFTPCP11686 197 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 TCP1P17987 556 aaKnown RBP13.93□□□□□ -0.18
HMGN3-201ENST00000275036 OGNP20774 298 aaKnown RBP13.93□□□□□ -0.18
HMGN3-201ENST00000275036 PTGIRP43119 386 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 GABRA4P48169 554 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 ADARP55265 1226 aaKnown RBP13.93□□□□□ -0.18
HMGN3-201ENST00000275036 GBX1Q14549 363 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 TMED2Q15363 201 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 CCSMST1Q4G0I0 132 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 PAPD7Q5XG87 772 aaKnown RBP13.93□□□□□ -0.18
HMGN3-201ENST00000275036 NEPROQ6NW34 567 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 UNC5DQ6UXZ4 953 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 SDCCAG8Q86SQ7 713 aaPredicted RBP13.93□□□□□ -0.18
HMGN3-201ENST00000275036 CREG2Q8IUH2 290 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 DCUN1D3Q8IWE4 304 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 DENND6AQ8IWF6 608 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 PPIL6Q8IXY8 311 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 C2orf73Q8N5S3 287 aaPredicted RBP13.93□□□□□ -0.18
HMGN3-201ENST00000275036 C19orf47Q8N9M1 422 aaKnown RBP13.93□□□□□ -0.18
HMGN3-201ENST00000275036 OR8K5Q8NH50 307 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 CAPZA3Q96KX2 299 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 TCF12Q99081 682 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 ACTL8Q9H568 366 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 ZNF71Q9NQZ8 489 aaPredicted RBP13.93□□□□□ -0.18
HMGN3-201ENST00000275036 SAMD15Q9P1V8 674 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 TUBD1Q9UJT1 453 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 ASH1LQ9NR48 2969 aaKnown RBP13.93□□□□□ -0.18
HMGN3-201ENST00000275036 PCSK5Q92824 1860 aa13.93□□□□□ -0.18
HMGN3-201ENST00000275036 UBR5O95071 2799 aaPredicted RBP13.92□□□□□ -0.18
HMGN3-201ENST00000275036 A0A0J9YY10 115 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 MAGEB16A2A368 324 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 CDC14CA4D256 554 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 H3BMH7 237 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 DNALI1O14645 258 aaPredicted RBP13.92□□□□□ -0.18
HMGN3-201ENST00000275036 BANF1O75531 89 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 CREG1O75629 220 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 S1PR4O95977 384 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 PAMP19021 973 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 NR1D1P20393 614 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 IVDP26440 423 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 RORAP35398 523 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 BDKRB1P46663 353 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 RAB28P51157 221 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 GNG11P61952 73 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 MC1RQ01726 317 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 CTBP1Q13363 440 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 IL10RAQ13651 578 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 PTK6Q13882 451 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 PPP1R7Q15435 360 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 SLC5A12Q1EHB4 618 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 DEFB110Q30KQ9 67 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 PLEKHS1Q5SXH7 462 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 RNF187Q5TA31 235 aaPredicted RBP13.92□□□□□ -0.18
HMGN3-201ENST00000275036 FAM69BQ5VUD6 431 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 ZNF470Q6ECI4 717 aa13.92□□□□□ -0.18
HMGN3-201ENST00000275036 OTOAQ7RTW8 1153 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms