RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 TMEM45AQ9NWC5 275 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 GULP1Q9UBP9 304 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 ZFR2Q9UPR6 939 aaKnown RBP14.98□□□□□ -0.01
COPS3-201ENST00000268717 SDK1Q7Z5N4 2213 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 CFAP54Q96N23 3096 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 ZNF292O60281 2723 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 MGAT4DA6NG13 374 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 H3BM21 787 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 OR4F21O95013 312 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 ZNF8P17098 575 aaPredicted RBP14.97□□□□□ -0.01
COPS3-201ENST00000268717 LBPP18428 481 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 FNTBP49356 437 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 ADPRHP54922 357 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 GRIK2Q13002 908 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 CYLC2Q14093 348 aaPredicted RBP14.97□□□□□ -0.01
COPS3-201ENST00000268717 GSTA3Q16772 222 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 C18orf21Q32NC0 220 aaPredicted RBP14.97□□□□□ -0.01
COPS3-201ENST00000268717 SPATA19Q7Z5L4 167 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 MILR1Q7Z6M3 343 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 TRIM74Q86UV6 250 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 CACUL1Q86Y37 369 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 ZNF547Q8IVP9 402 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 DDIASQ8IXT1 998 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 OR4F6Q8NGB9 312 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 ATP6V1E2Q96A05 226 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 MCUR1Q96AQ8 359 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 SIPA1Q96FS4 1042 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 WDR26Q9H7D7 661 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 POLG2Q9UHN1 485 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 NCKAP1Q9Y2A7 1128 aa14.97□□□□□ -0.01
COPS3-201ENST00000268717 ARHGEF33A8MVX0 844 aa14.96□□□□□ -0.01
COPS3-201ENST00000268717 PCCBP05166 539 aa14.96□□□□□ -0.01
COPS3-201ENST00000268717 HGFP14210 728 aa14.96□□□□□ -0.01
COPS3-201ENST00000268717 RAP1GDS1P52306 607 aa14.96□□□□□ -0.01
COPS3-201ENST00000268717 STX1BP61266 288 aa14.96□□□□□ -0.01
COPS3-201ENST00000268717 PCDH1Q08174 1060 aa14.96□□□□□ -0.01
COPS3-201ENST00000268717 SGCGQ13326 291 aa14.96□□□□□ -0.01
COPS3-201ENST00000268717 SMU1Q2TAY7 513 aa14.96□□□□□ -0.01
COPS3-201ENST00000268717 C11orf96Q7Z7L8 435 aa14.96□□□□□ -0.01
COPS3-201ENST00000268717 HORMAD1Q86X24 394 aa14.96□□□□□ -0.01
COPS3-201ENST00000268717 CAMKK1Q8N5S9 505 aa14.96□□□□□ -0.01
COPS3-201ENST00000268717 CDYL2Q8N8U2 506 aa14.96□□□□□ -0.01
COPS3-201ENST00000268717 SUMF1Q8NBK3 374 aa14.96□□□□□ -0.01
COPS3-201ENST00000268717 METTL6Q8TCB7 284 aa14.96□□□□□ -0.01
COPS3-201ENST00000268717 GANCQ8TET4 914 aa14.96□□□□□ -0.01
COPS3-201ENST00000268717 PHPT1Q9NRX4 125 aaPredicted RBP14.96□□□□□ -0.01
COPS3-201ENST00000268717 NDE1Q9NXR1 346 aa14.96□□□□□ -0.01
COPS3-201ENST00000268717 MMP17Q9ULZ9 603 aa14.96□□□□□ -0.01
COPS3-201ENST00000268717 CCDC163A0A0D9SF12 145 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 UGDHO60701 494 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 POP7O75817 140 aaKnown RBP14.95□□□□□ -0.02
COPS3-201ENST00000268717 WFS1O76024 890 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 CAPN1P07384 714 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 IDO1P14902 403 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 CPA2P48052 419 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 PREPP48147 710 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 IRF4Q15306 451 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.95□□□□□ -0.02
COPS3-201ENST00000268717 WASHC2DQ5SRD0 308 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 XKR5Q6UX68 686 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 UNC5DQ6UXZ4 953 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 MBOAT1Q6ZNC8 495 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 LRRTM4Q86VH4 590 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 WDR5BQ86VZ2 330 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 POU5F2Q8N7G0 328 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 DENND6BQ8NEG7 585 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 OR14C36Q8NHC7 312 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 TUBGCP3Q96CW5 907 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 HHIPQ96QV1 700 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 SLC17A9Q9BYT1 436 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 RMI1Q9H9A7 625 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 DNAJC11Q9NVH1 559 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 TIMM22Q9Y584 194 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 A0A1W2PQU0 124 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 PSMD12O00232 456 aaPredicted RBP14.95□□□□□ -0.02
COPS3-201ENST00000268717 RNGTTO60942 597 aaKnown RBP14.95□□□□□ -0.02
COPS3-201ENST00000268717 CLDN9O95484 217 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 HOXC4P09017 264 aaPredicted RBP14.95□□□□□ -0.02
COPS3-201ENST00000268717 LINC00032P0C843 101 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 MYCLP1P12525 358 aaPredicted RBP14.95□□□□□ -0.02
COPS3-201ENST00000268717 HMOX2P30519 316 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 PGM1P36871 562 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 GDF5P43026 501 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 PXNP49023 591 aaPredicted RBP14.95□□□□□ -0.02
COPS3-201ENST00000268717 MXRA7P84157 204 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 ZNF33BQ06732 778 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 FGL2Q14314 439 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 SNX32Q86XE0 403 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 CFAP206Q8IYR0 622 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 L3MBTL4Q8NA19 623 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 FAM13CQ8NE31 585 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 BTRCQ9Y297 605 aa14.95□□□□□ -0.02
COPS3-201ENST00000268717 ATP6AP2A0A1C7CYW4 349 aa14.94□□□□□ -0.02
COPS3-201ENST00000268717 KMOO15229 486 aa14.94□□□□□ -0.02
COPS3-201ENST00000268717 HRO43593 1189 aa14.94□□□□□ -0.02
COPS3-201ENST00000268717 KCNJ13O60928 360 aa14.94□□□□□ -0.02
COPS3-201ENST00000268717 ATP6AP2O75787 350 aa14.94□□□□□ -0.02
COPS3-201ENST00000268717 C1orf105O95561 183 aa14.94□□□□□ -0.02
COPS3-201ENST00000268717 ALDOCP09972 364 aaKnown RBP14.94□□□□□ -0.02
COPS3-201ENST00000268717 ACADMP11310 421 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms