RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 CDH3P22223 829 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 FDXRP22570 491 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 NDUFS1P28331 727 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 PEBP1P30086 187 aaKnown RBP7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 CCKBRP32239 447 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 STX2P32856 288 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 VSNL1P62760 191 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 GSTM4Q03013 218 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 PRKAA1Q13131 559 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 FASTKQ14296 549 aaKnown RBP7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 PHKG1Q16816 387 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 MROH9Q5TGP6 573 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 FAM45BPQ6NSW5 357 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 ARMC6Q6NXE6 501 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 RBM12BQ8IXT5 1001 aaKnown RBP7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 TBC1D21Q8IYX1 336 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 ADGRF3Q8IZF5 1079 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 WDR36Q8NI36 951 aaKnown RBP7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 FAM45AQ8TCE6 357 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 ANKRD49Q8WVL7 239 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 DLG3Q92796 817 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 FOPNLQ96NB1 174 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 RBBP8Q99708 897 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 CMKLR1Q99788 373 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 RHOJQ9H4E5 214 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 MVB12BQ9H7P6 319 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 POLR1BQ9H9Y6 1135 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 FOXJ2Q9P0K8 574 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 VWA7Q9Y334 891 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 DHRS7Q9Y394 339 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 KMT2BQ9UMN6 2715 aaPredicted RBP7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 KALRNO60229 2985 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 PIPSLA2A3N6 862 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 NPEPPSL1A6NEC2 478 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 SLC9B1P1A6NJY1 282 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 KPNA5O15131 536 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 SLU7O95391 586 aaKnown RBP7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 GUCA1CO95843 209 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 TSPAN12O95859 305 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 CHRM5P08912 532 aaPredicted RBP7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 EBLN1P0CF75 366 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 FGF3P11487 239 aaPredicted RBP7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 ST6GAL1P15907 406 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 ZNF37AP17032 561 aaPredicted RBP7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 PKLRP30613 574 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 GP5P40197 560 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 RAB28P51157 221 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 PLOD1Q02809 727 aaPredicted RBP7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 GBX1Q14549 363 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 USP10Q14694 798 aaKnown RBP7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 ERCC6LQ2NKX8 1250 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 FBXO48Q5FWF7 155 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 ANKS6Q68DC2 871 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 WDR74Q6RFH5 385 aaPredicted RBP7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 UBE2R2Q712K3 238 aaPredicted RBP7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 DENND1AQ8TEH3 1009 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 INPP5DQ92835 1189 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 EXT2Q93063 718 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 ALKBH8Q96BT7 664 aaKnown RBP7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 LIN37Q96GY3 246 aaPredicted RBP7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 CCDC86Q9H6F5 360 aaKnown RBP7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 UCK1Q9HA47 277 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 GPAMQ9HCL2 828 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 ACTR10Q9NZ32 417 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 RAXQ9Y2V3 346 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 COMMD10Q9Y6G5 202 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 PRRC2CQ9Y520 2896 aaKnown RBP7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 FAM208BQ5VWN6 2430 aa7.02□□□□□ -1.29
DEPDC1B-201ENST00000265036 TLN1Q9Y490 2541 aaKnown RBP7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 SPENQ96T58 3664 aaKnown RBP7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 TEX51A0A1B0GUA7 166 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 NCF1BA6NI72 391 aaPredicted RBP7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 SMIM23A6NLE4 172 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 NCF1CA8MVU1 366 aaPredicted RBP7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 HCRTR1O43613 425 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 TLX3O43711 291 aaPredicted RBP7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 MATN4O95460 622 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 SLC16A8O95907 504 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 CATP04040 527 aaKnown RBP7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 ITGA2BP08514 1039 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 NCF1P14598 390 aaPredicted RBP7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 UGT2B7P16662 529 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 MAGP20916 626 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 CD9P21926 228 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 PRDX3P30048 256 aaKnown RBP7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 SHMT2P34897 504 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 SLC12A2P55011 1212 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 TGIF1Q15583 401 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 PRAMEF17Q5VTA0 474 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 KLHL35Q6PF15 583 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 UNC5DQ6UXZ4 953 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 SLC26A11Q86WA9 606 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 SYTL1Q8IYJ3 562 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 MYO1HQ8N1T3 1032 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 AGBL5Q8NDL9 886 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 ZDHHC12Q96GR4 267 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 PRR11Q96HE9 360 aaPredicted RBP7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 PAFAH2Q99487 392 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 MIPEPQ99797 713 aa7.01□□□□□ -1.29
DEPDC1B-201ENST00000265036 CPNE1Q99829 537 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms