RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 PLAAQ9Y263 795 aa17.8■□□□□ 0.44
SDF4-201ENST00000263741 NPEPPSL1A6NEC2 478 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 PSIP1O75475 530 aaKnown RBP17.79■□□□□ 0.44
SDF4-201ENST00000263741 WISP3O95389 354 aaPredicted RBP17.79■□□□□ 0.44
SDF4-201ENST00000263741 MYZAPP0CAP1 466 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 MPC1LP0DKB6 136 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 SLCO1A2P46721 670 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 RAB10P61026 200 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 GPLD1P80108 840 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 CDCP2Q5VXM1 449 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 MBOAT1Q6ZNC8 495 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 RBM44Q6ZP01 1051 aaKnown RBP17.79■□□□□ 0.44
SDF4-201ENST00000263741 RAPH1Q70E73 1250 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 RCBTB1Q8NDN9 531 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 DHRS4Q9BTZ2 278 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 MENTQ9BUN1 341 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 SRMSQ9H3Y6 488 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 SNX15Q9NRS6 342 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 CLCA2Q9UQC9 943 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 SRRM3A6NNA2 597 aaPredicted RBP17.79■□□□□ 0.44
SDF4-201ENST00000263741 BTN3A3O00478 584 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 NDUFAB1O14561 156 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 CSO75390 466 aaKnown RBP17.79■□□□□ 0.44
SDF4-201ENST00000263741 MT-CO3P00414 261 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 ALDOAP04075 364 aaKnown RBP17.79■□□□□ 0.44
SDF4-201ENST00000263741 SLC35E2BP0CK96 405 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 POLR2CP19387 275 aaPredicted RBP17.79■□□□□ 0.44
SDF4-201ENST00000263741 IRF9Q00978 393 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 IRGCQ6NXR0 463 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 NEK10Q6ZWH5 1172 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 UBE2R2Q712K3 238 aaPredicted RBP17.79■□□□□ 0.44
SDF4-201ENST00000263741 EPS8L3Q8TE67 593 aaKnown RBP17.79■□□□□ 0.44
SDF4-201ENST00000263741 ASB11Q8WXH4 323 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 TSPAN17Q96FV3 270 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 PPM1MQ96MI6 270 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 TGM7Q96PF1 710 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 TBK1Q9UHD2 729 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 KLK13Q9UKR3 277 aa17.79■□□□□ 0.44
SDF4-201ENST00000263741 CDC7O00311 574 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 BTN3A1O00481 513 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 RPN2P04844 631 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 PHKG1Q16816 387 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 CEP85LQ5SZL2 805 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 PHF19Q5T6S3 580 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 FAM92BQ6ZTR7 304 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 AMIGO1Q86WK6 493 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 HRASLS2Q9NWW9 162 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 ASPMQ8IZT6 3477 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 MED19A0JLT2 244 aaPredicted RBP17.78■□□□□ 0.44
SDF4-201ENST00000263741 GSAPA4D1B5 854 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 PMS2P1A4D2B8 440 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 OR5K3A6NET4 321 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 A8MU76 341 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 FOXO6A8MYZ6 492 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 TRIM49D1C9J1S8 452 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 CAPN5O15484 640 aaPredicted RBP17.78■□□□□ 0.44
SDF4-201ENST00000263741 KIF1CO43896 1103 aaKnown RBP17.78■□□□□ 0.44
SDF4-201ENST00000263741 CATP04040 527 aaKnown RBP17.78■□□□□ 0.44
SDF4-201ENST00000263741 CCDC166P0CW27 439 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 PKLRP30613 574 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 TARDBPQ13148 414 aaKnown RBP eCLIP17.78■□□□□ 0.448e-8■■■■■ 67.4
SDF4-201ENST00000263741 CSHL1Q14406 222 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 LINC01555Q8NAE3 123 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 DENND1AQ8TEH3 1009 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 CCDC74BQ96LY2 380 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 TFB2MQ9H5Q4 396 aaKnown RBP17.78■□□□□ 0.44
SDF4-201ENST00000263741 POPDC3Q9HBV1 291 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 SPHK1Q9NYA1 384 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 POLG2Q9UHN1 485 aa17.78■□□□□ 0.44
SDF4-201ENST00000263741 HEATR5BQ9P2D3 2071 aa17.77■□□□□ 0.44
SDF4-201ENST00000263741 FRYQ5TBA9 3013 aa17.77■□□□□ 0.44
SDF4-201ENST00000263741 IGHV5-10-1A0A0J9YXX1 117 aa17.77■□□□□ 0.44
SDF4-201ENST00000263741 EIF3FO00303 357 aaPredicted RBP17.77■□□□□ 0.44
SDF4-201ENST00000263741 KIAA0754O94854 1291 aa17.77■□□□□ 0.44
SDF4-201ENST00000263741 JUPP14923 745 aa17.77■□□□□ 0.44
SDF4-201ENST00000263741 ATP1A2P50993 1020 aa17.77■□□□□ 0.44
SDF4-201ENST00000263741 DLG1Q12959 904 aa17.77■□□□□ 0.44
SDF4-201ENST00000263741 OOSP2Q86WS3 158 aa17.77■□□□□ 0.44
SDF4-201ENST00000263741 RASGRP3Q8IV61 690 aa17.77■□□□□ 0.44
SDF4-201ENST00000263741 SLITRK4Q8IW52 837 aa17.77■□□□□ 0.44
SDF4-201ENST00000263741 ZFPM2Q8WW38 1151 aa17.77■□□□□ 0.44
SDF4-201ENST00000263741 RAD51AP1Q96B01 352 aa17.77■□□□□ 0.44
SDF4-201ENST00000263741 PKP4Q99569 1192 aa17.77■□□□□ 0.44
SDF4-201ENST00000263741 UTP6Q9NYH9 597 aaKnown RBP17.77■□□□□ 0.44
SDF4-201ENST00000263741 ZNF180Q9UJW8 692 aa17.77■□□□□ 0.44
SDF4-201ENST00000263741 ENTPD2Q9Y5L3 495 aa17.77■□□□□ 0.44
SDF4-201ENST00000263741 GFYI3L273 518 aa17.76■□□□□ 0.43
SDF4-201ENST00000263741 ZW10O43264 779 aa17.76■□□□□ 0.43
SDF4-201ENST00000263741 TCEA3O75764 348 aa17.76■□□□□ 0.43
SDF4-201ENST00000263741 PEBP1P30086 187 aaKnown RBP17.76■□□□□ 0.43
SDF4-201ENST00000263741 SHMT2P34897 504 aa17.76■□□□□ 0.43
SDF4-201ENST00000263741 SERPINB8P50452 374 aa17.76■□□□□ 0.43
SDF4-201ENST00000263741 SERPINB9P50453 376 aa17.76■□□□□ 0.43
SDF4-201ENST00000263741 ISXQ2M1V0 245 aa17.76■□□□□ 0.43
SDF4-201ENST00000263741 TTC23LQ6PF05 361 aa17.76■□□□□ 0.43
SDF4-201ENST00000263741 FAM20CQ8IXL6 584 aa17.76■□□□□ 0.43
SDF4-201ENST00000263741 ADGRF3Q8IZF5 1079 aa17.76■□□□□ 0.43
SDF4-201ENST00000263741 DCBLD1Q8N8Z6 715 aa17.76■□□□□ 0.43
SDF4-201ENST00000263741 PPFIBP2Q8ND30 876 aa17.76■□□□□ 0.43
SDF4-201ENST00000263741 SCNM1Q9BWG6 230 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms