RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 HTRA3P83110 453 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 PPP2R2BQ00005 443 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 TSTA3Q13630 321 aaPredicted RBP12.71□□□□□ -0.37
SNX1-201ENST00000261889 ZNF846Q147U1 533 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 GDF6Q6KF10 455 aaPredicted RBP12.71□□□□□ -0.37
SNX1-201ENST00000261889 ZCCHC8Q6NZY4 707 aaKnown RBP12.71□□□□□ -0.37
SNX1-201ENST00000261889 DOK6Q6PKX4 331 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 C11orf74Q86VG3 221 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 PTRH1Q86Y79 214 aaKnown RBP12.71□□□□□ -0.37
SNX1-201ENST00000261889 ANKRD13BQ86YJ7 626 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 MCFD2Q8NI22 146 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 GTF2H4Q92759 462 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 FOXJ1Q92949 421 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 FBXO32Q969P5 355 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 KCNS3Q9BQ31 491 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 TMEM121BQ9BXQ6 578 aaPredicted RBP12.71□□□□□ -0.37
SNX1-201ENST00000261889 REXO4Q9GZR2 422 aaKnown RBP12.71□□□□□ -0.37
SNX1-201ENST00000261889 SCUBE2Q9NQ36 999 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 QPCTLQ9NXS2 382 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 PRSS21Q9Y6M0 314 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 UGT2B11O75310 529 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 IGLV3-25P01717 112 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 HOXD8P13378 290 aaPredicted RBP12.71□□□□□ -0.38
SNX1-201ENST00000261889 ACPPP15309 386 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 ZNF24P17028 368 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 PCMT1P22061 227 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 DNAJB2P25686 324 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 LIPAP38571 399 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 GATMP50440 423 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 ATP4BP51164 291 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 CRYBB1P53674 252 aaPredicted RBP12.71□□□□□ -0.38
SNX1-201ENST00000261889 CREMQ03060 361 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 GTF2H2Q13888 395 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 CLCA4Q14CN2 919 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 CCDC92Q53HC0 331 aaPredicted RBP12.71□□□□□ -0.38
SNX1-201ENST00000261889 XKR7Q5GH72 579 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 NADSYN1Q6IA69 706 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 GTF2H2CQ6P1K8 395 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 NECAB2Q7Z6G3 386 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 ZNF548Q8NEK5 533 aaPredicted RBP12.71□□□□□ -0.38
SNX1-201ENST00000261889 RSPH1Q8WYR4 309 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 MUL1Q969V5 352 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 ZHX1-C8orf76Q96EF9 292 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 CHCHD6Q9BRQ6 235 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 TFB2MQ9H5Q4 396 aaKnown RBP12.71□□□□□ -0.38
SNX1-201ENST00000261889 AKIP1Q9NQ31 210 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 KIF17Q9P2E2 1029 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 MAGEL2Q9UJ55 1249 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 ZNF490Q9ULM2 529 aaPredicted RBP12.71□□□□□ -0.38
SNX1-201ENST00000261889 PADI3Q9ULW8 664 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 GMPPBQ9Y5P6 360 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 PTCH2Q9Y6C5 1203 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 COL1A2P08123 1366 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 EYSQ5T1H1 3165 aa12.71□□□□□ -0.38
SNX1-201ENST00000261889 LOC730098B7Z3J9 87 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 MTX2O75431 263 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 CREG1O75629 220 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 MFN2O95140 757 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 ALDH2P05091 517 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 PGRP06401 933 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 PKMP14618 531 aaKnown RBP12.7□□□□□ -0.38
SNX1-201ENST00000261889 SLC6A4P31645 630 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 OR1E2P47887 323 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 CLK3P49761 638 aaKnown RBP12.7□□□□□ -0.38
SNX1-201ENST00000261889 MAP2K5Q13163 448 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 ADNP2Q6IQ32 1131 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 PDE12Q6L8Q7 609 aaKnown RBP12.7□□□□□ -0.38
SNX1-201ENST00000261889 DENND1CQ8IV53 801 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 ZDHHC21Q8IVQ6 265 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 ADGRG2Q8IZP9 1017 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 EID3Q8N140 333 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 MFSD4AQ8N468 514 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 PIK3C3Q8NEB9 887 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 PTCD2Q8WV60 388 aaKnown RBP12.7□□□□□ -0.38
SNX1-201ENST00000261889 KATNAL1Q9BW62 490 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 TRMT13Q9NUP7 481 aaKnown RBP12.7□□□□□ -0.38
SNX1-201ENST00000261889 ERVK13-1Q9NX77 482 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 SNX6Q9UNH7 406 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 STX7O15400 261 aaKnown RBP12.7□□□□□ -0.38
SNX1-201ENST00000261889 VPS26AO75436 327 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 GBAP04062 536 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 SERPINB1P30740 379 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 TTKP33981 857 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 DAPP51397 102 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 VLDLRP98155 873 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 GBX1Q14549 363 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 SLC14A2Q15849 920 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 ATAD3BQ5T9A4 648 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 STEAP3Q658P3 488 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 OR4F3Q6IEY1 312 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 CD300LGQ6UXG3 332 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 CCDC71Q8IV32 467 aaPredicted RBP12.7□□□□□ -0.38
SNX1-201ENST00000261889 RGL4Q8IZJ4 473 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 BRSK1Q8TDC3 778 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 ISG20Q96AZ6 181 aaKnown RBP12.7□□□□□ -0.38
SNX1-201ENST00000261889 ULK4Q96C45 1275 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 CSNK1G1Q9HCP0 422 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 ATP13A1Q9HD20 1204 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 WWOXQ9NZC7 414 aa12.7□□□□□ -0.38
SNX1-201ENST00000261889 FCF1Q9Y324 198 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms