RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 SPATA17Q96L03 361 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 DCBLD2Q96PD2 775 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 CDK5RAP1Q96SZ6 601 aaKnown RBP4.64□□□□□ -1.67
USP44-201ENST00000258499 DPH2Q9BQC3 489 aaPredicted RBP4.64□□□□□ -1.67
USP44-201ENST00000258499 ARHGAP39Q9C0H5 1083 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 POPDC3Q9HBV1 291 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 AASDHPPTQ9NRN7 309 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 TMEM9Q9P0T7 183 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 ERVK-18Q9QC07 812 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 ABCD2Q9UBJ2 740 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 UTS2RQ9UKP6 389 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 SARDHQ9UL12 918 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 SLC22A14Q9Y267 594 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 PTPRFP10586 1907 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 FUOMA2VDF0 154 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 MANSC4A6NHS7 340 aaPredicted RBP4.64□□□□□ -1.67
USP44-201ENST00000258499 C5orf58C9J3I9 102 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 CNOT3O75175 753 aaKnown RBP4.64□□□□□ -1.67
USP44-201ENST00000258499 BCAS1O75363 584 aaPredicted RBP4.64□□□□□ -1.67
USP44-201ENST00000258499 MFN2O95140 757 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 IGSF6O95976 241 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 IGLV3-25P01717 112 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 BCKDHAP12694 445 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 HOXD8P13378 290 aaPredicted RBP4.64□□□□□ -1.67
USP44-201ENST00000258499 CD36P16671 472 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 GGT1P19440 569 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 CYP2A7P20853 494 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 HRH2P25021 359 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 HOXC13P31276 330 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 PIGAP37287 484 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 CSKP41240 450 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 BCAP31P51572 246 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 HK3P52790 923 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 NCS1P62166 190 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 ADAM17P78536 824 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 PRKCZQ05513 592 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 RAPSNQ13702 412 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 PON2Q15165 354 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 SPDYE7PQ495Y7 208 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 USP39Q53GS9 565 aaKnown RBP4.64□□□□□ -1.67
USP44-201ENST00000258499 PYCR3Q53H96 274 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 INO80DQ53TQ3 878 aaPredicted RBP4.64□□□□□ -1.67
USP44-201ENST00000258499 RBM48Q5RL73 367 aaKnown RBP4.64□□□□□ -1.67
USP44-201ENST00000258499 ADGRF1Q5T601 910 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 NADSYN1Q6IA69 706 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 PRR23BQ6ZRT6 265 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 VTCN1Q7Z7D3 282 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 SPARTQ8N0X7 666 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 SVOPLQ8N434 492 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 FBXO22Q8NEZ5 403 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 ABHD11Q8NFV4 315 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 UPF1Q92900 1129 aaKnown RBP eCLIP4.64□□□□□ -1.67
USP44-201ENST00000258499 OTULINQ96BN8 352 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 CHCHD6Q9BRQ6 235 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 HERC2P3Q9BVR0 1158 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 YTHDF1Q9BYJ9 559 aaKnown RBP4.64□□□□□ -1.67
USP44-201ENST00000258499 WDR12Q9GZL7 423 aaKnown RBP4.64□□□□□ -1.67
USP44-201ENST00000258499 TPK1Q9H3S4 243 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 ATP13A3Q9H7F0 1226 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 MAGEE1Q9HCI5 957 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 ADPRHL2Q9NX46 363 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 SAMD4AQ9UPU9 718 aaKnown RBP4.64□□□□□ -1.67
USP44-201ENST00000258499 DHRS7Q9Y394 339 aa4.64□□□□□ -1.67
USP44-201ENST00000258499 PNMA8CA0A1B0GUJ8 204 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 KRT87PA6NCN2 255 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 CLIC1O00299 241 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 SLC1A7O00341 560 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 MANBAO00462 879 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 E2F3O00716 465 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 SYN3O14994 580 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 SEPT4O43236 478 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 COCHO43405 550 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 TRBC1P01850 177 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 GBAP04062 536 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 FABP3P05413 133 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 CHRM5P08912 532 aaPredicted RBP4.63□□□□□ -1.67
USP44-201ENST00000258499 ENGP17813 658 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 DCTP40126 519 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 ALDH9A1P49189 494 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 ZNF140P52738 457 aaPredicted RBP4.63□□□□□ -1.67
USP44-201ENST00000258499 TMBIM6P55061 237 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 ZXDBP98169 803 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 RELAQ04206 551 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 SFSWAPQ12872 951 aaKnown RBP4.63□□□□□ -1.67
USP44-201ENST00000258499 CRHR2Q13324 411 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 NAE1Q13564 534 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 IHHQ14623 411 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 MED22Q15528 200 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 PTCHD3Q3KNS1 767 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 CYP27C1Q4G0S4 372 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 COQ5Q5HYK3 327 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 COLEC12Q5KU26 742 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 RTP2Q5QGT7 225 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 RSBN1Q5VWQ0 802 aaPredicted RBP4.63□□□□□ -1.67
USP44-201ENST00000258499 DCDC5Q6ZRR9 648 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 LIMS2Q7Z4I7 341 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 ADCK2Q7Z695 626 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 SPRED1Q7Z699 444 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 ZNF605Q86T29 641 aa4.63□□□□□ -1.67
USP44-201ENST00000258499 IGFN1Q86VF2 1251 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms