RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 RIPOR1Q6ZS17 1223 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 TAS1R3Q7RTX0 852 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 CUZD1Q86UP6 607 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 SCUBE1Q8IWY4 988 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 SPEM1Q8N4L4 309 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 OR52K2Q8NGK3 314 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 SHKBP1Q8TBC3 707 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 OXNAD1Q96HP4 312 aaPredicted RBP13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 CATSPER2Q96P56 530 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 CDADC1Q9BWV3 514 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 DERL2Q9GZP9 239 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 KCND3Q9UK17 655 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 PLCL2Q9UPR0 1127 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 SH3PXD2BA1X283 911 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 SCDO00767 359 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 C4BPBP20851 252 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 VIPR2P41587 438 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 ZNF41P51814 821 aaPredicted RBP13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 CYP1B1Q16678 543 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 MARCH8Q5T0T0 291 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 ASPGQ86U10 573 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 ZNF440Q8IYI8 595 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 ZCCHC10Q8TBK6 192 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 TMEM245Q9H330 911 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 PELI2Q9HAT8 420 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 SIN3BO75182 1162 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 UGT2B17O75795 530 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 RNH1P13489 461 aaKnown RBP13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 SOX4Q06945 474 aaPredicted RBP13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 TIMM50Q3ZCQ8 353 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 MANEALQ5VSG8 457 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 MACC1Q6ZN28 852 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 HEATR4Q86WZ0 1026 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 FGFBP2Q9BYJ0 223 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 CSNK1G1Q9HCP0 422 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 PHIPQ8WWQ0 1821 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 E7EQ34 232 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 MAGEB3O15480 346 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 ABLIM3O94929 683 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 CYB5AP00167 134 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 PROS1P07225 676 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 CRISP3P54108 245 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 SLC10A7Q0GE19 358 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 RALGDSQ12967 914 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 KIR2DS3Q14952 304 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 TOR1AIP1Q5JTV8 583 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 ANKRD49Q8WVL7 239 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 MYLIPQ8WY64 445 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 HDAC8Q9BY41 377 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 ACP6Q9NPH0 428 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 LAMB2P55268 1798 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 SNX4O95219 450 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 HLA-EP13747 358 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 ATP6V1B2P21281 511 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 GRK6P43250 576 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 SERTAD2Q14140 314 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 HGSNATQ68CP4 663 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 CPNE9Q8IYJ1 553 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 OR8K5Q8NH50 307 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 TPD52L3Q96J77 140 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 ANKRD27Q96NW4 1050 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 HIST1H2AAQ96QV6 131 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 PALMDQ9NP74 551 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 MARK1Q9P0L2 795 aa13.13□□□□□ -0.31
PRPF38A-201ENST00000257181 WNT7AO00755 349 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 ARHGEF15O94989 841 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 C6P13671 934 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 PTPN4P29074 926 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 SLC7A1P30825 629 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 ACVRL1P37023 503 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 CCR5P51681 352 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 NAGLUP54802 743 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 RACK1P63244 317 aaKnown RBP13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 TMEM259Q4ZIN3 620 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 MANEAQ5SRI9 462 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 LIPJQ5W064 366 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 NEK10Q6ZWH5 1172 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 DENND6AQ8IWF6 608 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 DEFB126Q9BYW3 111 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 PNO1Q9NRX1 252 aaKnown RBP13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 NKIRAS2Q9NYR9 191 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 ANKMY1Q9P2S6 941 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 CCDC162PA2VCL2 907 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 C2orf78A6NCI8 922 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 DRGXA6NNA5 263 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 STX16-NPEPL1H3BU86 382 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 STX16O14662 325 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 FFAR3O14843 346 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 GPR42O15529 346 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 HOXC11O43248 304 aaPredicted RBP13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 PRPS1L1P21108 318 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 CD27P26842 260 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 NUMBP49757 651 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 EEFSECP57772 596 aaKnown RBP13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 GUCY1A3Q02108 690 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 FAM189A2Q15884 450 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 TTC23Q5W5X9 447 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 BTBD9Q96Q07 612 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 METTL7AQ9H8H3 244 aa13.12□□□□□ -0.31
PRPF38A-201ENST00000257181 RRP15Q9Y3B9 282 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms