RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 SCGNO76038 276 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 SLC22A15Q8IZD6 547 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 H7C0S8 307 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 K7EPI3 171 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 ARVCFO00192 962 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 AREL1O15033 823 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 KHNYNO15037 678 aaKnown RBP18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 NDUFS4O43181 175 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 USP30Q70CQ3 517 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 RANBP3LQ86VV4 465 aaPredicted RBP18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 OSTM1Q86WC4 334 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 OR4C6Q8NH72 309 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 NSMCE3Q96MG7 304 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 HSD3B7Q9H2F3 369 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 ADH5P11766 374 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 ACTR3P61158 418 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 TMPRSS9Q7Z410 1059 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 C1QTNF1Q9BXJ1 281 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 C11orf49Q9H6J7 331 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 WFS1O76024 890 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 PSMA1P25786 263 aaKnown RBP18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 CLCN7P51798 805 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 ADGRF1Q5T601 910 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 SMYD5Q6GMV2 418 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 FAM46DQ8NEK8 389 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 HAPLN3Q96S86 360 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 GSDMCQ9BYG8 508 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 TAC3Q9UHF0 121 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 ADGRE1Q14246 886 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 GLIS1Q8NBF1 620 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 MTMR14Q8NCE2 650 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 NAXEQ8NCW5 288 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 TSTD1Q8NFU3 115 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 DNAJA2O60884 412 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 TEAD2Q15562 447 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 XKR4Q5GH76 650 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 EBF3Q9H4W6 596 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 CHMP1AQ9HD42 196 aaPredicted RBP18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 PMF1-BGLAPU3KQ54 211 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 A0A1W2PRB8 838 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 C8orf89P0DMQ9 161 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 S100GP29377 79 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 VLDLRP98155 873 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 KIAA1161Q6NSJ0 714 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 KCNK6Q9Y257 313 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 HAS3O00219 553 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 OC90Q02509 493 aaPredicted RBP18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 TEAD4Q15561 434 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 SMU1Q2TAY7 513 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 RBM20Q5T481 1227 aaKnown RBP18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 ZDHHC24Q6UX98 284 aa18.32■□□□□ 0.52
SMARCC1-201ENST00000254480 CENPNQ96H22 339 aaPredicted RBP18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 KCNC2Q96PR1 638 aa18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 PHF12Q96QT6 1004 aa18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 GALPQ9UBC7 116 aa18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 LGALS13Q9UHV8 139 aa18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 RWDD3Q9Y3V2 267 aa18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 CDC7O00311 574 aa18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 OGDHQ02218 1023 aa18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 IFI44LQ53G44 452 aa18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 KIAA0930Q6ICG6 404 aaPredicted RBP18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 INTS10Q9NVR2 710 aaKnown RBP18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 IFT80Q9P2H3 777 aaPredicted RBP18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 PTGES3Q15185 160 aaKnown RBP18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 Q8N9G6 341 aaPredicted RBP18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 CDKN2AIPNLQ96HQ2 116 aa18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 NTPCRQ9BSD7 190 aaKnown RBP18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 ZCCHC3Q9NUD5 404 aaKnown RBP18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 OGNP20774 298 aaKnown RBP18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 GRK6P43250 576 aa18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 BTN3A2P78410 334 aa18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 RGS17Q9UGC6 210 aaPredicted RBP18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 TBC1D24Q9ULP9 559 aa18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 RUVBL1Q9Y265 456 aaKnown RBP18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 ERI3O43414 337 aaKnown RBP18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 NRIP1P48552 1158 aa18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 OLR1P78380 273 aa18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 OR4F3Q6IEY1 312 aa18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 FCRL5Q96RD9 977 aa18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 MYO5BQ9ULV0 1848 aa18.31■□□□□ 0.52
SMARCC1-201ENST00000254480 NPHS1O60500 1241 aa18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 NAT8LQ8N9F0 302 aa18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 EBF2Q9HAK2 575 aa18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 POMPQ9Y244 141 aa18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 CHST10O43529 356 aa18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 PI15O43692 258 aa18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 CCL5P13501 91 aa18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 CCKBRP32239 447 aa18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 PHF19Q5T6S3 580 aa18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 SLC39A4Q6P5W5 647 aa18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 KCTD8Q6ZWB6 473 aa18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 DGCR14Q96DF8 476 aaKnown RBP18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 OSBPL7Q9BZF2 842 aa18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 PDLIM1O00151 329 aa18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 SLC30A4O14863 429 aa18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 AIREO43918 545 aa18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 JUNP05412 331 aaKnown RBP18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 FCER2P06734 321 aa18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 PRPS2P11908 318 aa18.3■□□□□ 0.52
SMARCC1-201ENST00000254480 RNF144AP50876 292 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms