RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 CAPNS1P04632 268 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 CYP11A1P05108 521 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 TACR1P25103 407 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 GSTM2P28161 218 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 GNPDA1P46926 289 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 COPZ1P61923 177 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 FAM214AQ32MH5 1076 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 SPRYD7Q5W111 196 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 CACTIN-AS1Q8N1I8 211 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 UMODL1-AS1Q8N2C9 162 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 BPIFB1Q8TDL5 484 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 FAR1Q8WVX9 515 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 ASIC4Q96FT7 647 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 ZFYVE19Q96K21 471 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 MBOAT4Q96T53 435 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 SLCO3A1Q9UIG8 710 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 CDH7Q9ULB5 785 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 TLR6Q9Y2C9 796 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 TPRKBQ9Y3C4 175 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 DOCK3Q8IZD9 2030 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 TMEM221A6NGB7 291 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 H0YAE9 185 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 K7ERQ8 282 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 AQP9O43315 295 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 B4GALT3O60512 393 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 TULP3O75386 442 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 SULT1C4O75897 302 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 PRAMEF1O95521 474 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 OTCP00480 354 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 RPS17P08708 135 aaKnown RBP11.71□□□□□ -0.53
USHBP1-201ENST00000252597 S100A5P33763 92 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 IL10RBQ08334 325 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 TAF1CQ15572 869 aaPredicted RBP11.71□□□□□ -0.53
USHBP1-201ENST00000252597 TAB1Q15750 504 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 DCP2Q8IU60 420 aaKnown RBP11.71□□□□□ -0.53
USHBP1-201ENST00000252597 FAM217AQ8IXS0 508 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 CD200R1Q8TD46 325 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 DPF3Q92784 378 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 MAL2Q969L2 176 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 LGALS12Q96DT0 336 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 SMAD5Q99717 465 aaKnown RBP11.71□□□□□ -0.53
USHBP1-201ENST00000252597 DCSTAMPQ9H295 470 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 EHD1Q9H4M9 534 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 VNN3Q9NY84 501 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 TMEM9Q9P0T7 183 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 SH3BP4Q9P0V3 963 aa11.71□□□□□ -0.53
USHBP1-201ENST00000252597 MBLAC1A4D2B0 266 aaPredicted RBP11.71□□□□□ -0.54
USHBP1-201ENST00000252597 UPK1AO00322 258 aa11.71□□□□□ -0.54
USHBP1-201ENST00000252597 INSIG1O15503 277 aa11.71□□□□□ -0.54
USHBP1-201ENST00000252597 RGS10O43665 173 aa11.71□□□□□ -0.54
USHBP1-201ENST00000252597 GBAP04062 536 aa11.71□□□□□ -0.54
USHBP1-201ENST00000252597 OR1E2P47887 323 aa11.71□□□□□ -0.54
USHBP1-201ENST00000252597 TTPAP49638 278 aa11.71□□□□□ -0.54
USHBP1-201ENST00000252597 RBM48Q5RL73 367 aaKnown RBP11.71□□□□□ -0.54
USHBP1-201ENST00000252597 SZRD1Q7Z422 152 aa11.71□□□□□ -0.54
USHBP1-201ENST00000252597 RHEBL1Q8TAI7 183 aa11.71□□□□□ -0.54
USHBP1-201ENST00000252597 HDAC2Q92769 488 aaKnown RBP11.71□□□□□ -0.54
USHBP1-201ENST00000252597 MTERF1Q99551 399 aaKnown RBP11.71□□□□□ -0.54
USHBP1-201ENST00000252597 TSEN34Q9BSV6 310 aaKnown RBP11.71□□□□□ -0.54
USHBP1-201ENST00000252597 PRRG3Q9BZD7 231 aa11.71□□□□□ -0.54
USHBP1-201ENST00000252597 CSNK1G1Q9HCP0 422 aa11.71□□□□□ -0.54
USHBP1-201ENST00000252597 PRDM5Q9NQX1 630 aaPredicted RBP11.71□□□□□ -0.54
USHBP1-201ENST00000252597 GPRC5BQ9NZH0 403 aa11.71□□□□□ -0.54
USHBP1-201ENST00000252597 ZIM2Q9NZV7 527 aa11.71□□□□□ -0.54
USHBP1-201ENST00000252597 PCDHB5Q9Y5E4 795 aa11.71□□□□□ -0.54
USHBP1-201ENST00000252597 AIREO43918 545 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 CDKN2CP42773 168 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 RGS4P49798 205 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 GATMP50440 423 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 POM121L1PQ3SYA9 428 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 NEK10Q6ZWH5 1172 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 SERPINA9Q86WD7 417 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 HIPK1Q86Z02 1210 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 LEMD2Q8NC56 503 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 FAM83FQ8NEG4 500 aaPredicted RBP11.7□□□□□ -0.54
USHBP1-201ENST00000252597 PPP1R14BQ96C90 147 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 DUS3LQ96G46 650 aaKnown RBP11.7□□□□□ -0.54
USHBP1-201ENST00000252597 PARK7Q99497 189 aaKnown RBP11.7□□□□□ -0.54
USHBP1-201ENST00000252597 OSBPL10Q9BXB5 764 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 BEX2Q9BXY8 128 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 WDR12Q9GZL7 423 aaKnown RBP11.7□□□□□ -0.54
USHBP1-201ENST00000252597 TNKS2Q9H2K2 1166 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 ACTL8Q9H568 366 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 ARNT2Q9HBZ2 717 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 TAS2R16Q9NYV7 291 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 RAPGEFL1Q9UHV5 662 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 CD84Q9UIB8 345 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 DLGAP4Q9Y2H0 992 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 MED16Q9Y2X0 877 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 BOLA1Q9Y3E2 137 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 DNMT3AQ9Y6K1 912 aaPredicted RBP11.7□□□□□ -0.54
USHBP1-201ENST00000252597 ASNA1O43681 348 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 GJB5O95377 273 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 KRT8P05787 483 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 DNAJB1P25685 340 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 RPL9P32969 192 aaKnown RBP11.7□□□□□ -0.54
USHBP1-201ENST00000252597 FOXM1Q08050 763 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 CLCA4Q14CN2 919 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 MED22Q15528 200 aa11.7□□□□□ -0.54
USHBP1-201ENST00000252597 CARD16Q5EG05 197 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms