RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 TRPV3Q8NET8 790 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 MAGEE2Q8TD90 523 aaPredicted RBP15.39■□□□□ 0.05
LRFN1-201ENST00000248668 POF1BQ8WVV4 589 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 FBXL20Q96IG2 436 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 NSMCE2Q96MF7 247 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 LYSMD1Q96S90 227 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 RIOK2Q9BVS4 552 aaKnown RBP15.39■□□□□ 0.05
LRFN1-201ENST00000248668 SLC2A11Q9BYW1 496 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 ZDHHC4Q9NPG8 344 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 SLC6A13Q9NSD5 602 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 TCRBV5S2A0A599 114 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 CLDN9O95484 217 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 ENO2P09104 434 aaPredicted RBP15.38■□□□□ 0.05
LRFN1-201ENST00000248668 HIST1H2AGP0C0S8 130 aaPredicted RBP15.38■□□□□ 0.05
LRFN1-201ENST00000248668 ATP1B2P14415 290 aaPredicted RBP15.38■□□□□ 0.05
LRFN1-201ENST00000248668 HIST1H2ADP20671 130 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 TACR1P25103 407 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 METAP1P53582 386 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 TSTA3Q13630 321 aaPredicted RBP15.38■□□□□ 0.05
LRFN1-201ENST00000248668 NEK5Q6P3R8 708 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 AHI1Q8N157 1196 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 TSPEARQ8WU66 669 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 DUS3LQ96G46 650 aaKnown RBP15.38■□□□□ 0.05
LRFN1-201ENST00000248668 HIST1H2AHQ96KK5 128 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 EGLN2Q96KS0 407 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 MCCC1Q96RQ3 725 aaPredicted RBP15.38■□□□□ 0.05
LRFN1-201ENST00000248668 CCT7Q99832 543 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 HIST1H2AJQ99878 128 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 H2AFJQ9BTM1 129 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 EMILIN2Q9BXX0 1053 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 EBPLQ9BY08 206 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 ELOVL6Q9H5J4 265 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 PCDH12Q9NPG4 1184 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 SPATA7Q9P0W8 599 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 SCN8AQ9UQD0 1980 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 AOAHP28039 575 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 PREPP48147 710 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 MESP2Q0VG99 397 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 TCEAL5Q5H9L2 206 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 WRAP53Q9BUR4 548 aaKnown RBP15.38■□□□□ 0.05
LRFN1-201ENST00000248668 CHID1Q9BWS9 393 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 FAM83DQ9H4H8 585 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 DENND4CQ5VZ89 1909 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 PIM1P11309 404 aaPredicted RBP15.38■□□□□ 0.05
LRFN1-201ENST00000248668 POLR2EP19388 210 aaKnown RBP15.38■□□□□ 0.05
LRFN1-201ENST00000248668 EFNA1P20827 205 aaPredicted RBP15.38■□□□□ 0.05
LRFN1-201ENST00000248668 XPAP23025 273 aaPredicted RBP15.38■□□□□ 0.05
LRFN1-201ENST00000248668 HALP42357 657 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 RPL5P46777 297 aaKnown RBP15.38■□□□□ 0.05
LRFN1-201ENST00000248668 PGS1Q32NB8 556 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 CACHD1Q5VU97 1274 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 PPP4R4Q6NUP7 873 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 METTL3Q86U44 580 aaKnown RBP15.38■□□□□ 0.05
LRFN1-201ENST00000248668 OR52E6Q96RD3 313 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 SAGE1Q9NXZ1 904 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 GMEB1Q9Y692 573 aa15.38■□□□□ 0.05
LRFN1-201ENST00000248668 AGAP14A8MT82 685 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 KCNH1O95259 989 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 PGRP06401 933 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 CTSLP07711 333 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 CDK4P11802 303 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 BCKDHAP12694 445 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 PCSK6P29122 969 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 EEFSECP57772 596 aaKnown RBP15.37■□□□□ 0.05
LRFN1-201ENST00000248668 CREMQ03060 361 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 ZIK1Q3SY52 487 aaPredicted RBP15.37■□□□□ 0.05
LRFN1-201ENST00000248668 NHSL2Q5HYW2 709 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 GCNT7Q6ZNI0 430 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 ZNF786Q8N393 782 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 CENPNQ96H22 339 aaPredicted RBP15.37■□□□□ 0.05
LRFN1-201ENST00000248668 ZFYVE19Q96K21 471 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 SLC32A1Q9H598 525 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 PARVBQ9HBI1 364 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 UTS2RQ9UKP6 389 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 CNOT11Q9UKZ1 510 aaKnown RBP15.37■□□□□ 0.05
LRFN1-201ENST00000248668 COQ6Q9Y2Z9 468 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 DLGAP1O14490 977 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 AP1G1O43747 822 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 PRAMEF4O60810 478 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 EBLN1P0CF75 366 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 CCT8P50990 548 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 IST1P53990 364 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 PRAMEF9Q5VWM5 478 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 CARM1Q86X55 608 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 APOLD1Q96LR9 279 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 HPS4Q9NQG7 708 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 PKD2L2Q9NZM6 624 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 ERVW-1Q9UQF0 538 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 REV3LO60673 3130 aa15.37■□□□□ 0.05
LRFN1-201ENST00000248668 PLK4O00444 970 aa15.36■□□□□ 0.05
LRFN1-201ENST00000248668 GSTA4O15217 222 aa15.36■□□□□ 0.05
LRFN1-201ENST00000248668 C1QCP02747 245 aa15.36■□□□□ 0.05
LRFN1-201ENST00000248668 CCR3P51677 355 aa15.36■□□□□ 0.05
LRFN1-201ENST00000248668 LAPTM5Q13571 262 aa15.36■□□□□ 0.05
LRFN1-201ENST00000248668 PWP1Q13610 501 aa15.36■□□□□ 0.05
LRFN1-201ENST00000248668 GRIN2CQ14957 1233 aa15.36■□□□□ 0.05
LRFN1-201ENST00000248668 CCSMST1Q4G0I0 132 aa15.36■□□□□ 0.05
LRFN1-201ENST00000248668 C1orf53Q5VUE5 145 aa15.36■□□□□ 0.05
LRFN1-201ENST00000248668 TBPL2Q6SJ96 375 aa15.36■□□□□ 0.05
LRFN1-201ENST00000248668 TRIML2Q8N7C3 387 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms