RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 ABCG8Q9H221 673 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 SLC25A13Q9UJS0 675 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 PCDHGA11Q9Y5H2 935 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 LRRC14BA6NHZ5 514 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 NCF1BA6NI72 391 aaPredicted RBP12.82□□□□□ -0.36
PLOD3-201ENST00000223127 NCF1CA8MVU1 366 aaPredicted RBP12.82□□□□□ -0.36
PLOD3-201ENST00000223127 E5RI56 91 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 PPP6CO00743 305 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 BCAS1O75363 584 aaPredicted RBP12.82□□□□□ -0.36
PLOD3-201ENST00000223127 SIX3O95343 332 aaPredicted RBP12.82□□□□□ -0.36
PLOD3-201ENST00000223127 NCF1P14598 390 aaPredicted RBP12.82□□□□□ -0.36
PLOD3-201ENST00000223127 PKMP14618 531 aaKnown RBP12.82□□□□□ -0.36
PLOD3-201ENST00000223127 TCF3P15923 654 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 ITGB6P18564 788 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 HRH2P25021 359 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 DDX6P26196 483 aaKnown RBP eCLIP12.82□□□□□ -0.363e-6■■□□□ 12.2
PLOD3-201ENST00000223127 PBX2P40425 430 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 VIPR2P41587 438 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 NFYCQ13952 458 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 ZNF77Q15935 545 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 PFKFB4Q16877 469 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 PRSS36Q5K4E3 855 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 CHST14Q8NCH0 376 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 DNAJB14Q8TBM8 379 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 SMG7Q92540 1137 aaKnown RBP12.82□□□□□ -0.36
PLOD3-201ENST00000223127 HPS1Q92902 700 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 ZNF707Q96C28 371 aaPredicted RBP12.82□□□□□ -0.36
PLOD3-201ENST00000223127 NOTCH4Q99466 2003 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 MTG2Q9H4K7 406 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 IKZF3Q9UKT9 509 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 NPIPB15A6NHN6 443 aaPredicted RBP12.82□□□□□ -0.36
PLOD3-201ENST00000223127 UPK1AO00322 258 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 FGF19O95750 216 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 PFKLP17858 780 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 ARSFP54793 590 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 ECT2LQ008S8 904 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 CTSL3PQ5NE16 218 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 DEPDC1Q5TB30 811 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 AGAP7PQ5VUJ5 663 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 TMEM215Q68D42 235 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 CCDC80Q76M96 950 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 CLDN19Q8N6F1 224 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 ZNF366Q8N895 744 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 LEMD2Q8NC56 503 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 BPIFB1Q8TDL5 484 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 TMEM74Q96NL1 305 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 BOCQ9BWV1 1114 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 CIPCQ9C0C6 399 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 WDR12Q9GZL7 423 aaKnown RBP12.82□□□□□ -0.36
PLOD3-201ENST00000223127 ASB8Q9H765 288 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 NTN4Q9HB63 628 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 HMG20AQ9NP66 347 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 SDR39U1Q9NRG7 319 aaPredicted RBP12.82□□□□□ -0.36
PLOD3-201ENST00000223127 POLG2Q9UHN1 485 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 ENPP5Q9UJA9 477 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 HS3ST2Q9Y278 367 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 RBMX2Q9Y388 322 aaKnown RBP12.82□□□□□ -0.36
PLOD3-201ENST00000223127 C5orf67F2Z3F1 127 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 CDC7O00311 574 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 CDK14O94921 469 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 TGM1P22735 817 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 TSNQ15631 228 aaKnown RBP12.81□□□□□ -0.36
PLOD3-201ENST00000223127 GEN1Q17RS7 908 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 POM121L1PQ3SYA9 428 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 TCEAL5Q5H9L2 206 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 RBM48Q5RL73 367 aaKnown RBP12.81□□□□□ -0.36
PLOD3-201ENST00000223127 CRTC3Q6UUV7 619 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 CLYBLQ8N0X4 340 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 PTGR2Q8N8N7 351 aaPredicted RBP12.81□□□□□ -0.36
PLOD3-201ENST00000223127 ZFYVE19Q96K21 471 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 KCNA7Q96RP8 456 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 ADNPQ9H2P0 1102 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 TUBB1Q9H4B7 451 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 LTB4R2Q9NPC1 389 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 IL26Q9NPH9 171 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 WARS2Q9UGM6 360 aaKnown RBP12.81□□□□□ -0.36
PLOD3-201ENST00000223127 PFDN6O15212 129 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 VPS26AO75436 327 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 HNRNPA1P09651 372 aaKnown RBP eCLIP12.81□□□□□ -0.36
PLOD3-201ENST00000223127 THRBP10828 461 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 UMPSP11172 480 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 MAPK8P45983 427 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 SUOXP51687 545 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 PIGFQ07326 219 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 DAG1Q14118 895 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 SKIV2LQ15477 1246 aaKnown RBP12.81□□□□□ -0.36
PLOD3-201ENST00000223127 KCNJ8Q15842 424 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 PHKG1Q16816 387 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 DPY19L1Q2PZI1 675 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 SPATS1Q496A3 300 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 COQ5Q5HYK3 327 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 BLOC1S3Q6QNY0 202 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 FRA10AC1Q70Z53 315 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 DSG4Q86SJ6 1040 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 ADIPOR2Q86V24 386 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 ANKRD13BQ86YJ7 626 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 SLC7A5P1Q8MH63 180 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 ZFP90Q8TF47 636 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 MUL1Q969V5 352 aa12.81□□□□□ -0.36
PLOD3-201ENST00000223127 VPS33AQ96AX1 596 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms