RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 ZNF446Q9NWS9 450 aa18.89■□□□□ 0.61
SNAPC2-201ENST00000221573 SNRNP200O75643 2136 aaKnown RBP18.88■□□□□ 0.61
SNAPC2-201ENST00000221573 IGHV1OR21-1A0A087WYE8 117 aa18.88■□□□□ 0.61
SNAPC2-201ENST00000221573 SPAARA0A1B0GVQ0 90 aa18.88■□□□□ 0.61
SNAPC2-201ENST00000221573 COL6A2P12110 1019 aa18.88■□□□□ 0.61
SNAPC2-201ENST00000221573 TYRP1P17643 537 aa18.88■□□□□ 0.61
SNAPC2-201ENST00000221573 KRT4P19013 534 aa18.88■□□□□ 0.61
SNAPC2-201ENST00000221573 PKLRP30613 574 aa18.88■□□□□ 0.61
SNAPC2-201ENST00000221573 KCNC1P48547 511 aa18.88■□□□□ 0.61
SNAPC2-201ENST00000221573 AMZ1Q400G9 498 aa18.88■□□□□ 0.61
SNAPC2-201ENST00000221573 NKAIN2Q5VXU1 208 aa18.88■□□□□ 0.61
SNAPC2-201ENST00000221573 CROCCP2Q86T23 111 aa18.88■□□□□ 0.61
SNAPC2-201ENST00000221573 OR9A1PQ8NGU1 263 aa18.88■□□□□ 0.61
SNAPC2-201ENST00000221573 MCOLN3Q8TDD5 553 aa18.88■□□□□ 0.61
SNAPC2-201ENST00000221573 OGFRQ9NZT2 677 aa18.88■□□□□ 0.61
SNAPC2-201ENST00000221573 NOVA2Q9UNW9 492 aaKnown RBP18.88■□□□□ 0.61
SNAPC2-201ENST00000221573 OARD1Q9Y530 152 aa18.88■□□□□ 0.61
SNAPC2-201ENST00000221573 PCM1Q15154 2024 aa18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 UBXN7O94888 489 aa18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 GUCA1CO95843 209 aa18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 GP1BAP07359 652 aa18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 ENO2P09104 434 aaPredicted RBP18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 MYZAPP0CAP1 466 aa18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 EPHA4P54764 986 aa18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 CCL7P80098 99 aa18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 ACAP2Q15057 778 aa18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 TNFAIP8L3Q5GJ75 292 aa18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 TECRLQ5HYJ1 363 aa18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 FRA10AC1Q70Z53 315 aa18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 AMIGO1Q86WK6 493 aa18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 EXT2Q93063 718 aa18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 SRMSQ9H3Y6 488 aa18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 SYNDIG1Q9H7V2 258 aa18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 VIPAS39Q9H9C1 493 aa18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 RNF112Q9ULX5 631 aa18.87■□□□□ 0.61
SNAPC2-201ENST00000221573 A0A1W2PQM1 296 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 MAP2K7O14733 419 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 RFPL3O75679 317 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 SLC16A8O95907 504 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 RPLP0P05388 317 aaKnown RBP18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 PROS1P07225 676 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 CREB1P16220 341 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 PPM1FP49593 454 aaPredicted RBP18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 RAB28P51157 221 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 NOVA1P51513 510 aaKnown RBP18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 SLC18A2Q05940 514 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 TSNAXIP1Q2TAA8 658 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 KLC3Q6P597 504 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 CDHR3Q6ZTQ4 885 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 C2orf73Q8N5S3 287 aaPredicted RBP18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 LINC01555Q8NAE3 123 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 OR10G6Q8NH81 332 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 PGM2Q96G03 612 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 SCYL1Q96KG9 808 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 TSNARE1Q96NA8 513 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 ATOH8Q96SQ7 321 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 TMBIM4Q9HC24 238 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 ARL15Q9NXU5 204 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 TMEM216Q9P0N5 145 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 SPATA7Q9P0W8 599 aa18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 CNOT1A5YKK6 2376 aaKnown RBP18.86■□□□□ 0.61
SNAPC2-201ENST00000221573 OR6C74A6NCV1 312 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 NCF1BA6NI72 391 aaPredicted RBP18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 NCF1CA8MVU1 366 aaPredicted RBP18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 BTN3A3O00478 584 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 KDM1AO60341 852 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 KERAO60938 352 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 HIST1H2AGP0C0S8 130 aaPredicted RBP18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 CEACAM1P13688 526 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 NCF1P14598 390 aaPredicted RBP18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 AMD1P17707 334 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 HIST1H2ADP20671 130 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 CD1CP29017 333 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 IMPA1P29218 277 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 CSF2RBP32927 897 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 SHMT2P34897 504 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 CAPZBP47756 277 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 FASTKQ14296 549 aaKnown RBP18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 TGFBIQ15582 683 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 C16orf46Q6P387 395 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 SLCO6A1Q86UG4 719 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 TAX1BP1Q86VP1 789 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 GPSM1Q86YR5 675 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 ADGRF3Q8IZF5 1079 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 PPFIBP2Q8ND30 876 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 RHEBL1Q8TAI7 183 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 STAG3L4Q8TBR4 150 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 ZNF480Q8WV37 535 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 AHCYL2Q96HN2 611 aaKnown RBP18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 HIST1H2AHQ96KK5 128 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 HIST1H2AJQ99878 128 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 RTKNQ9BST9 563 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 H2AFJQ9BTM1 129 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 TRIM54Q9BYV2 358 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 LRRN3Q9H3W5 708 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 RDH14Q9HBH5 336 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 STOX2Q9P2F5 926 aaPredicted RBP18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 XPR1Q9UBH6 696 aa18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 ATXN7L1Q9ULK2 861 aaPredicted RBP18.85■□□□□ 0.61
SNAPC2-201ENST00000221573 PABPN1LA6NDY0 278 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms