RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 METTL11BQ5VVY1 283 aa13.35□□□□□ -0.27
GABPB1-201ENST00000220429 OVOS1Q6IE37 1185 aa13.35□□□□□ -0.27
GABPB1-201ENST00000220429 LIPIQ6XZB0 460 aa13.35□□□□□ -0.27
GABPB1-201ENST00000220429 BEND5Q7L4P6 421 aa13.35□□□□□ -0.27
GABPB1-201ENST00000220429 RPL3LQ92901 407 aaKnown RBP13.35□□□□□ -0.27
GABPB1-201ENST00000220429 CERS2Q96G23 380 aa13.35□□□□□ -0.27
GABPB1-201ENST00000220429 CELF6Q96J87 481 aaKnown RBP13.35□□□□□ -0.27
GABPB1-201ENST00000220429 ELMO2Q96JJ3 720 aa13.35□□□□□ -0.27
GABPB1-201ENST00000220429 SMOC2Q9H3U7 446 aa13.35□□□□□ -0.27
GABPB1-201ENST00000220429 ZNF639Q9UID6 485 aa13.35□□□□□ -0.27
GABPB1-201ENST00000220429 TBC1D24Q9ULP9 559 aa13.35□□□□□ -0.27
GABPB1-201ENST00000220429 MAPRE3Q9UPY8 281 aa13.35□□□□□ -0.27
GABPB1-201ENST00000220429 NRP2O60462 931 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 IGLV3-25P01717 112 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 TFEBP19484 476 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 NFKB1P19838 968 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 SREBF2Q12772 1141 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 MRPL28Q13084 256 aaKnown RBP13.34□□□□□ -0.27
GABPB1-201ENST00000220429 EIF4EBP2Q13542 120 aaPredicted RBP13.34□□□□□ -0.27
GABPB1-201ENST00000220429 SPANXN3Q5MJ09 141 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 KLHDC9Q8NEP7 349 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 OR8H1Q8NGG4 311 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 ST8SIA4Q92187 359 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 RNF34Q969K3 372 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 NIPAL2Q9H841 368 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 CASS4Q9NQ75 786 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 ZNF358Q9NW07 568 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 C14orf119Q9NWQ9 140 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 NEU3Q9UQ49 428 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 PRELID3BQ9Y3B1 194 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 PCDHGB1Q9Y5G3 927 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 HRH3Q9Y5N1 445 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 CASP8AP2Q9UKL3 1982 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 EFCAB9A8MZ26 197 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 TFECO14948 347 aaPredicted RBP13.34□□□□□ -0.27
GABPB1-201ENST00000220429 MTHFD1P11586 935 aaKnown RBP13.34□□□□□ -0.27
GABPB1-201ENST00000220429 PGFP49763 221 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 RGS1Q08116 209 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 AANATQ16613 207 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 CCDC36Q8IYA8 594 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 OR8K5Q8NH50 307 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 WDR48Q8TAF3 677 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 ZNF669Q96BR6 464 aaPredicted RBP13.34□□□□□ -0.27
GABPB1-201ENST00000220429 TMCO6Q96DC7 493 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 SAV1Q9H4B6 383 aaPredicted RBP13.34□□□□□ -0.27
GABPB1-201ENST00000220429 CD93Q9NPY3 652 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 USP22Q9UPT9 525 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 HSPB11Q9Y547 144 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 FRMPD3Q5JV73 1810 aa13.34□□□□□ -0.27
GABPB1-201ENST00000220429 TRIM13O60858 407 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 LDLRP01130 860 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 FTH1P02794 183 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 C2P06681 752 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 HDCP19113 662 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 AGXTP21549 392 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 DGCR6Q14129 220 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 RETSATQ6NUM9 610 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 TMEM135Q86UB9 458 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 GPAT4Q86UL3 456 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 YIPF7Q8N8F6 280 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 DNAJA4Q8WW22 397 aaPredicted RBP13.33□□□□□ -0.27
GABPB1-201ENST00000220429 RIT1Q92963 219 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 RBM14Q96PK6 669 aaKnown RBP13.33□□□□□ -0.27
GABPB1-201ENST00000220429 TSEN34Q9BSV6 310 aaKnown RBP13.33□□□□□ -0.27
GABPB1-201ENST00000220429 OSBPL2Q9H1P3 480 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 GPBP1L1Q9HC44 474 aaPredicted RBP13.33□□□□□ -0.27
GABPB1-201ENST00000220429 SIRT5Q9NXA8 310 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 VTI1BQ9UEU0 232 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 EGFL7Q9UHF1 273 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 TRHDEQ9UKU6 1024 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 ACTL7AQ9Y615 435 aa13.33□□□□□ -0.27
GABPB1-201ENST00000220429 ZCWPW2A0A1B0GU75 182 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 ATP6AP2A0A1C7CYW4 349 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 CCDC182A6NF36 153 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 BTN3A1O00481 513 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 MRASO14807 208 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 SSX5O60225 188 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 B4GALT3O60512 393 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 JCHAINP01591 159 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 GPIP06744 558 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 F7P08709 466 aaPredicted RBP13.33□□□□□ -0.28
GABPB1-201ENST00000220429 GMPRP36959 345 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 HNF4AP41235 474 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 ZNF273Q14593 569 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 CTU2Q2VPK5 515 aaKnown RBP13.33□□□□□ -0.28
GABPB1-201ENST00000220429 CERCAMQ5T4B2 595 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 FAM45BPQ6NSW5 357 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 OR8H3Q8N146 312 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 ZNF557Q8N988 423 aaPredicted RBP13.33□□□□□ -0.28
GABPB1-201ENST00000220429 DNAAF3Q8N9W5 541 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 SETD6Q8TBK2 473 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 FAM45AQ8TCE6 357 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 STON2Q8WXE9 905 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 UFD1Q92890 307 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 PTP4A1Q93096 173 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 SUSD3Q96L08 255 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 APOL2Q9BQE5 337 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 GATA5Q9BWX5 397 aaPredicted RBP13.33□□□□□ -0.28
GABPB1-201ENST00000220429 FTHL17Q9BXU8 183 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 KAT8Q9H7Z6 458 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms