RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 KDM1BQ8NB78 822 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 OR9Q1Q8NGQ5 310 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 PKMYT1Q99640 499 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 INTS7Q9NVH2 962 aaKnown RBP11.8□□□□□ -0.52
CHPF2-201ENST00000035307 ZNF510Q9Y2H8 683 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 MAP4K5Q9Y4K4 846 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.8□□□□□ -0.52
CHPF2-201ENST00000035307 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.8□□□□□ -0.52
CHPF2-201ENST00000035307 NPIPB15A6NHN6 443 aaPredicted RBP11.8□□□□□ -0.52
CHPF2-201ENST00000035307 G3V2T6 193 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 ESR1P03372 595 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 PTGER3P43115 390 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 KIR3DL1P43629 444 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 RPS9P46781 194 aaKnown RBP11.8□□□□□ -0.52
CHPF2-201ENST00000035307 DEPDC1Q5TB30 811 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 ADHFE1Q8IWW8 467 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 ZNF540Q8NDQ6 660 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 MZB1Q8WU39 189 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 DGCR14Q96DF8 476 aaKnown RBP11.8□□□□□ -0.52
CHPF2-201ENST00000035307 ZNF419Q96HQ0 510 aaPredicted RBP11.8□□□□□ -0.52
CHPF2-201ENST00000035307 EURLQ9NYK6 297 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 RSL24D1Q9UHA3 163 aaKnown RBP11.8□□□□□ -0.52
CHPF2-201ENST00000035307 TMCC3Q9ULS5 477 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 PLAGL1Q9UM63 463 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 NUMBLQ9Y6R0 609 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 PRORSD1PA6NEY8 169 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 DNTTP04053 509 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 S100A5P33763 92 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 IST1P53990 364 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 BNIP2Q12982 314 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 FAM78AQ5JUQ0 283 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 FAM180BQ6P0A1 224 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 DSG4Q86SJ6 1040 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 VANGL1Q8TAA9 524 aaPredicted RBP11.8□□□□□ -0.52
CHPF2-201ENST00000035307 FOXJ1Q92949 421 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 USE1Q9NZ43 259 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 DNAJC15Q9Y5T4 150 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 KCNE2Q9Y6J6 123 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 WDR90Q96KV7 1748 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 MICAL3Q7RTP6 2002 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 C1QTNF3-AMACRE9PGA6 284 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 TPST2O60704 377 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 ALDH1A2O94788 518 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 DBTP11182 482 aaKnown RBP11.79□□□□□ -0.52
CHPF2-201ENST00000035307 HTR7P34969 479 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 SERPINB10P48595 397 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 ERVK-21P61565 698 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 C11orf91Q3C1V1 193 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 CYP27C1Q4G0S4 372 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 ATP13A5Q4VNC0 1218 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 ARMCX6Q7L4S7 300 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 ENDOVQ8N8Q3 282 aaKnown RBP11.79□□□□□ -0.52
CHPF2-201ENST00000035307 OR10G6Q8NH81 332 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 CEP250Q9BV73 2442 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 AHCYL1O43865 530 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 RECQL5O94762 991 aaPredicted RBP11.79□□□□□ -0.52
CHPF2-201ENST00000035307 CLDN9O95484 217 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 HPCAP84074 193 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 ZXDBP98169 803 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 MEF2AQ02078 507 aaPredicted RBP11.79□□□□□ -0.52
CHPF2-201ENST00000035307 GK3PQ14409 553 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 PDGFRLQ15198 375 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 TLR1Q15399 786 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 TYW3Q6IPR3 259 aaKnown RBP11.79□□□□□ -0.52
CHPF2-201ENST00000035307 KDELC1Q6UW63 502 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 ARHGAP22Q7Z5H3 698 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 ISCA2Q86U28 154 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 CPA6Q8N4T0 437 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 PHC3Q8NDX5 983 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 GAS2L1Q99501 681 aaPredicted RBP11.79□□□□□ -0.52
CHPF2-201ENST00000035307 EQTNQ9NQ60 294 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 KLHL3Q9UH77 587 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 RWDD3Q9Y3V2 267 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 ELOVL7A1L3X0 281 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 H3BM21 787 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 KERAO60938 352 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 OGNP20774 298 aaKnown RBP11.79□□□□□ -0.52
CHPF2-201ENST00000035307 CNTN1Q12860 1018 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 TJAP1Q5JTD0 557 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 PDSS2Q86YH6 399 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 ZCCHC7Q8N3Z6 543 aaKnown RBP11.79□□□□□ -0.52
CHPF2-201ENST00000035307 OR5AK3PQ8NH89 298 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 SLC13A3Q8WWT9 602 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 CHFRQ96EP1 664 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 C3orf30Q96M34 536 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 ERVW-1Q9UQF0 538 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 ARIH1Q9Y4X5 557 aaPredicted RBP11.79□□□□□ -0.52
CHPF2-201ENST00000035307 CACNA1GO43497 2377 aa11.79□□□□□ -0.52
CHPF2-201ENST00000035307 PRKD3O94806 890 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 PGLSO95336 258 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 FADS2O95864 444 aaKnown RBP11.78□□□□□ -0.52
CHPF2-201ENST00000035307 ACP5P13686 325 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 GNAZP19086 355 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 PIGFQ07326 219 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 CSTF3Q12996 717 aaKnown RBP11.78□□□□□ -0.52
CHPF2-201ENST00000035307 MTA1Q13330 715 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 OR4F3Q6IEY1 312 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 CXorf57Q6NSI4 855 aaKnown RBP11.78□□□□□ -0.52
CHPF2-201ENST00000035307 SLC22A15Q8IZD6 547 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 SFRP1Q8N474 314 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms