RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 ARHGEF15O94989 841 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 SLC25A14O95258 325 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 HPRP00739 348 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 C9P02748 559 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 CDH1P12830 882 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 LTKP29376 864 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 CASP1P29466 404 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 VSX2P58304 361 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 FADDQ13158 208 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 PTCHD3Q3KNS1 767 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 RAET1GQ6H3X3 334 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 C15orf52Q6ZUT6 534 aaKnown RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 SKA3Q8IX90 412 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 OR52K1Q8NGK4 314 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 AGAP2Q99490 1192 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 MARCH7Q9H992 704 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF224Q9NZL3 707 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 IRS2Q9Y4H2 1338 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 CAPN8A6NHC0 703 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 SGPL1O95470 568 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 SPARCP09486 303 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 MAGEA12P43365 314 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 CLCN4P51793 760 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 ARF5P84085 180 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 HLFQ16534 295 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 PIGGQ5H8A4 983 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 FAM171A1Q5VUB5 890 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 CDC42EP5Q6NZY7 148 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 UBE2Q1Q7Z7E8 422 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 TMEM199Q8N511 208 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 PTGR2Q8N8N7 351 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 SLC2A14Q8TDB8 520 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 NINJ1Q92982 152 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 PFDN5Q99471 154 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 POP1Q99575 1024 aaKnown RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 PI4K2AQ9BTU6 479 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 MALT1Q9UDY8 824 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 FBXO5Q9UKT4 447 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 CYP11A1P05108 521 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 RBBP4Q09028 425 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 BST1Q10588 318 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 BNIP1Q12981 228 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 KIAA0895Q8NCT3 520 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 OR56A1Q8NGH5 318 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 SPATA20Q8TB22 786 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 METTL2AQ96IZ6 378 aaKnown RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 CCM2Q9BSQ5 444 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 ELOVL2Q9NXB9 296 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 KLHL13Q9P2N7 655 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 KIAA2026Q5HYC2 2103 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 hCG_1818297A0A087WSY0 165 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 NPC1O15118 1278 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 HSD3B2P26439 372 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 ACVR2AP27037 513 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 UGT3A2Q3SY77 523 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 GPR107Q5VW38 600 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 SLC22A15Q8IZD6 547 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 GHDCQ8N2G8 530 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 OSGEPQ9NPF4 335 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 RNF181Q9P0P0 153 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 MRPS7Q9Y2R9 242 aaKnown RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 MAU2Q9Y6X3 613 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 BLACEA4D250 179 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 AK1P00568 194 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 PROZP22891 400 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 LIMK2P53671 638 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 GPX6P59796 221 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 RPL38P63173 70 aaKnown RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 MRPS10P82664 201 aaKnown RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 ECT2LQ008S8 904 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 TAF1AQ15573 450 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 GTF2IRD2BQ6EKJ0 949 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF783Q6ZMS7 281 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 CUZD1Q86UP6 607 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 GTF2IRD2Q86UP8 949 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 SCUBE3Q8IX30 993 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 ITFG2Q969R8 447 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 AGO1Q9UL18 857 aaKnown RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 DOCK2Q92608 1830 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 TBC1D3BA6NDS4 549 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 EIF3FO00303 357 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 MID1O15344 667 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 KCNJ13O60928 360 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 CSDE1O75534 798 aaKnown RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 ETFAP13804 333 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 BMP8BP34820 402 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 IFI44LQ53G44 452 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 PLEKHG7Q6ZR37 379 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 BMP8AQ7Z5Y6 402 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 GALNT13Q8IUC8 556 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 ZSCAN4Q8NAM6 433 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 AGAP11Q8TF27 550 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 ASB13Q8WXK3 278 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 ATG4AQ8WYN0 398 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 HSPA12BQ96MM6 686 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 CD180Q99467 661 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 UCK2Q9BZX2 261 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 MKKSQ9NPJ1 570 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 POLR3BQ9NW08 1133 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 PDP1Q9P0J1 537 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms