RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 NIPAL1Q6NVV3 410 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 TBC1D21Q8IYX1 336 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 CLDN19Q8N6F1 224 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 ZNF781Q8N8C0 355 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 OR9A1PQ8NGU1 263 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 GLYATL1Q969I3 302 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 DGAT2Q96PD7 388 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 SLC29A3Q9BZD2 475 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 PNO1Q9NRX1 252 aaKnown RBP10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 DDX28Q9NUL7 540 aaKnown RBP10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 TMLHEQ9NVH6 421 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 ZSCAN32Q9NX65 697 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 C19orf25Q9UFG5 118 aaPredicted RBP10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 PACSIN3Q9UKS6 424 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 KCTD3Q9Y597 815 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 COL22A1Q8NFW1 1626 aaPredicted RBP10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 XKRYO14609 159 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 VEGFDO43915 354 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 ETV3P41162 512 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 USP46P62068 366 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 KCNC3Q14003 757 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 FAM92BQ6ZTR7 304 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 LRRTM3Q86VH5 581 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 ZC3HC1Q86WB0 502 aaKnown RBP10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 HEATR4Q86WZ0 1026 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 CILP2Q8IUL8 1156 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 TRPV1Q8NER1 839 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 ZMIZ2Q8NF64 920 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 OR2T3Q8NH03 318 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 DUSP26Q9BV47 211 aa10.14□□□□□ -0.79
NIPAL3-201ENST00000003912 IFNW1P05000 195 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 NCBP2P52298 156 aaKnown RBP eCLIP10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 PRRT3Q5FWE3 981 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 FAM26DQ5JW98 314 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 EMC10Q5UCC4 262 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 FRG2Q64ET8 278 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 GLYATQ6IB77 296 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 KLHDC10Q6PID8 442 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 KCNJ9Q92806 393 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 MTERF3Q96E29 417 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 FRG2BQ96QU4 278 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 DERL2Q9GZP9 239 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 ZNF446Q9NWS9 450 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 THUMPD1Q9NXG2 353 aaKnown RBP10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 PHF11Q9UIL8 331 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 CNOT6Q9ULM6 557 aaKnown RBP10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 GSTK1Q9Y2Q3 226 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 MFN2O95140 757 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 CD247P20963 164 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 PITX1P78337 314 aaPredicted RBP10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 KRR1Q13601 381 aaKnown RBP10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 LRRC26Q2I0M4 334 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 ZC3H14Q6PJT7 736 aaKnown RBP10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 YTHDF3Q7Z739 585 aaKnown RBP10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 TMEM25Q86YD3 366 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 GPR151Q8TDV0 419 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 MYDGFQ969H8 173 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 ZHX1-C8orf76Q96EF9 292 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 SLC22A14Q9Y267 594 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 STON1Q9Y6Q2 735 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 MGRN1O60291 552 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 AHSGP02765 367 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 SAGP10523 405 aaPredicted RBP10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 CSNK2BP67870 215 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 IRF9Q00978 393 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 OC90Q02509 493 aaPredicted RBP10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 EIPR1Q53HC9 387 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 MLIPQ5VWP3 458 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 ALKBH2Q6NS38 261 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 AGTRAPQ6RW13 159 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 CD248Q9HCU0 757 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 HSFX1Q9UBD0 423 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 PCDHGA2Q9Y5H1 932 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 C2orf74A8MZ97 194 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 TGFB1P01137 390 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 PRPS1L1P21108 318 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 PRDX6P30041 224 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 NRF1Q16656 503 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 PM20D1Q6GTS8 502 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 ZDHHC24Q6UX98 284 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 JAZF1Q86VZ6 243 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 EEF1AKMT1Q8WVE0 214 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 SLC5A11Q8WWX8 675 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 HLA-CQ95604 372 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 CDADC1Q9BWV3 514 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 LRMDAQ9H2I8 198 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 C12orf65Q9H3J6 166 aaKnown RBP10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 LCHNA4D1U4 455 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 ST13P50502 369 aaKnown RBP10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 MLLT1Q03111 559 aaPredicted RBP10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 ZBTB6Q15916 424 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 ARMCX4Q5H9R4 360 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 SLC8B1Q6J4K2 584 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 SLC36A4Q6YBV0 504 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 SLC29A4Q7RTT9 530 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 SLC30A8Q8IWU4 369 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 SLC38A4Q969I6 547 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 PMEPA1Q969W9 287 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 ALKBH4Q9NXW9 302 aa10.13□□□□□ -0.79
NIPAL3-201ENST00000003912 SLCO3A1Q9UIG8 710 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms