RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Aldh1a7O35945 501 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Aldh1a1P24549 501 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Il1rnP25085 178 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 CremP27699 357 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Oaz1P54369 227 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 MedagQ14BA6 303 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Pyroxd2Q3U4I7 581 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Tas2r129Q7M709 320 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Zbtb24Q80X44 710 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Pomt2Q8BGQ4 820 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Zbtb46Q8BID6 600 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Nae1Q8VBW6 534 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 1700018B08RikQ9DA83 213 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Pld1Q9Z280 1074 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Heg1E9Q7X6 1337 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Chd2E9PZM4 1827 aaKnown RBP9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gm4756A0A140LIS8 335 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ttll11A4Q9F4 727 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Bbip1J3QMK2 67 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gm17026K7N6Z0 213 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 DgkaO88673 730 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Psmd3P14685 530 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Serpina7P61939 418 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Aarsd1Q3THG9 412 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Spag1Q80ZX8 901 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 SynbQ8BI41 618 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Znf385bQ8BXJ8 482 aaKnown RBP9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Tmem203Q8R235 136 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Olfr385Q8VGT1 312 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 NepnQ9CQ76 512 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Teddm3Q9CQH1 294 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Alg5Q9DB25 324 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Taf8Q9EQH4 308 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Epb41l4bQ9JMC8 527 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Fam151bD3YUE4 279 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ccdc149F6V035 524 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ces2hF6Z9B9 558 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Zfp809G3X9G7 402 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Vmn2r93L7N1Z9 857 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Apex1P28352 317 aaKnown RBP9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Guk1Q64520 198 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Xpnpep1Q6P1B1 623 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Aifm2Q8BUE4 373 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Stfa2l1Q8BWM3 103 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Slc38a4Q8R1S9 547 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Olfr1487Q8VFQ6 315 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Fads1Q920L1 447 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gemin2Q9CQQ4 269 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Natd1Q9DBW3 110 aa9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Pak1ip1Q9DCE5 382 aaKnown RBP9.98□□□□□ -0.81
Ubr1-201ENSMUST00000028728 DccP70211 1447 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Btbd35f16A0A087WSN2 498 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Nhsl2B1AXH1 854 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Hsd17b14E9Q3D4 273 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 MaptP10637 733 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Fmo5P97872 533 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Sox8Q04886 464 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ebf1Q07802 591 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Fam35aQ3UEN2 891 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Slc30a1Q60738 503 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Prkg2Q61410 762 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Dusp16Q6PCP3 660 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Fam129bQ8R1F1 749 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Olfr700Q8VFM5 316 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 TmlheQ91ZE0 421 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 PdgfdQ925I7 370 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 B4galt5Q9JMK0 388 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Slc25a14Q9Z2B2 325 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 NktrP30415 1453 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Glipr1l3A0A1W2P7V2 236 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Arfip1G5E8V9 373 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 GcatO88986 416 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Zfp28P10078 825 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Fbln1Q08879 705 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Cyb5r2Q3KNK3 276 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Fbxw11Q5SRY7 542 aaKnown RBP9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 PterQ60866 349 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Nup62Q63850 526 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Tas2r38Q7TQA6 331 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ppp1r1cQ8BKK4 108 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Qsox1Q8BND5 748 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Rin1Q921Q7 763 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Plscr1Q9JJ00 328 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Psmd4O35226 376 aaKnown RBP9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Slc17a6Q8BLE7 582 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Pcdhb4Q91XZ6 784 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Tmem159Q922Z1 161 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Olfr2Q9QWU6 327 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 CasrQ9QY96 1079 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Khdrbs2Q9WU01 349 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Rfc2Q9WUK4 349 aaKnown RBP9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Skint1A7TZE6 364 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Tsga10ipF7A1F0 157 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Elovl3O35949 271 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Per1O35973 1291 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 CkmP07310 381 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Agtr2P35374 363 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 RykQ01887 594 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Secisbp2Q3U1C4 858 aaKnown RBP9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ube2j2Q6P073 259 aa9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms