RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 GFERP55789 205 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 RAB10P61026 200 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 PPP1CAP62136 330 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 LRRC8EQ6NSJ5 796 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 ADGRD1Q6QNK2 874 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 ZNF574Q6ZN55 896 aaPredicted RBP12.82□□□□□ -0.36
GTF3A-209ENST00000640289 UBE2R2Q712K3 238 aaPredicted RBP12.82□□□□□ -0.36
GTF3A-209ENST00000640289 RAB44Q7Z6P3 723 aaPredicted RBP12.82□□□□□ -0.36
GTF3A-209ENST00000640289 B3GNT8Q7Z7M8 397 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 RASGRP3Q8IV61 690 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 NKAPQ8N5F7 415 aaKnown RBP12.82□□□□□ -0.36
GTF3A-209ENST00000640289 OR2W6PQ8NHA6 318 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 ASB11Q8WXH4 323 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 DLG3Q92796 817 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 MENTQ9BUN1 341 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 SRMSQ9H3Y6 488 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 TFB2MQ9H5Q4 396 aaKnown RBP12.82□□□□□ -0.36
GTF3A-209ENST00000640289 POPDC3Q9HBV1 291 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 SYTL2Q9HCH5 934 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 SNX15Q9NRS6 342 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 CTNNAL1Q9UBT7 734 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 KLHL3Q9UH77 587 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 ZNF180Q9UJW8 692 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 NPEPPSL1A6NEC2 478 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 OR5K3A6NET4 321 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 TRIM49D1C9J1S8 452 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 GFYI3L273 518 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 AGRPO00253 132 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 CDC7O00311 574 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 BTN3A1O00481 513 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 TCEA3O75764 348 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 CATP04040 527 aaKnown RBP12.81□□□□□ -0.36
GTF3A-209ENST00000640289 ALDOAP04075 364 aaKnown RBP12.81□□□□□ -0.36
GTF3A-209ENST00000640289 TUBBP07437 444 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 SLC35E2BP0CK96 405 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 CCDC166P0CW27 439 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 POLR2CP19387 275 aaPredicted RBP12.81□□□□□ -0.36
GTF3A-209ENST00000640289 SPINK2P20155 84 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 PKLRP30613 574 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 CCNFP41002 786 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 SERPINB9P50453 376 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 CSRP3P50461 194 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 IRF9Q00978 393 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 SQSTM1Q13501 440 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 TTC23LQ6PF05 361 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 RBM44Q6ZP01 1051 aaKnown RBP12.81□□□□□ -0.36
GTF3A-209ENST00000640289 RAPH1Q70E73 1250 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 AMIGO1Q86WK6 493 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 C2orf73Q8N5S3 287 aaPredicted RBP12.81□□□□□ -0.36
GTF3A-209ENST00000640289 WDR48Q8TAF3 677 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 DENND1AQ8TEH3 1009 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 RAD51AP1Q96B01 352 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 CCDC77Q9BR77 488 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 SEMA6CQ9H3T2 930 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 HRASLS2Q9NWW9 162 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 TBK1Q9UHD2 729 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 CLCA2Q9UQC9 943 aa12.81□□□□□ -0.36
GTF3A-209ENST00000640289 PCNX2A6NKB5 2137 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 IGHV5-10-1A0A0J9YXX1 117 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 SMIM23A6NLE4 172 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 RASGRF2O14827 1237 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 CAPN5O15484 640 aaPredicted RBP12.8□□□□□ -0.36
GTF3A-209ENST00000640289 ZBTB14O43829 449 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 KIF1CO43896 1103 aaKnown RBP12.8□□□□□ -0.36
GTF3A-209ENST00000640289 CSO75390 466 aaKnown RBP12.8□□□□□ -0.36
GTF3A-209ENST00000640289 KRT38O76015 456 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 SYF2O95926 243 aaKnown RBP12.8□□□□□ -0.36
GTF3A-209ENST00000640289 C2P06681 752 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 TYK2P29597 1187 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 SLCO1A2P46721 670 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 SERPINB8P50452 374 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 DLG1Q12959 904 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 CSHL1Q14406 222 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 PHKG1Q16816 387 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 SNAP47Q5SQN1 464 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 IRGCQ6NXR0 463 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 TMEM71Q6P5X7 295 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 WDR74Q6RFH5 385 aaPredicted RBP12.8□□□□□ -0.36
GTF3A-209ENST00000640289 MBOAT1Q6ZNC8 495 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 TAOK1Q7L7X3 1001 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 TMPRSS7Q7RTY8 843 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 TAX1BP1Q86VP1 789 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 OOSP2Q86WS3 158 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 TMPRSS12Q86WS5 348 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 SLITRK4Q8IW52 837 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 ADGRF3Q8IZF5 1079 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 MREGQ8N565 214 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 LINC01555Q8NAE3 123 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 MAGEC3Q8TD91 643 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 EPS8L3Q8TE67 593 aaKnown RBP12.8□□□□□ -0.36
GTF3A-209ENST00000640289 PDLIM5Q96HC4 596 aaKnown RBP12.8□□□□□ -0.36
GTF3A-209ENST00000640289 UBXN10Q96LJ8 280 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 TGM7Q96PF1 710 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 PKP4Q99569 1192 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 EPB41L1Q9H4G0 881 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 PSMC3IPQ9P2W1 217 aaPredicted RBP12.8□□□□□ -0.36
GTF3A-209ENST00000640289 FETUBQ9UGM5 382 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 KLK13Q9UKR3 277 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 PDE10AQ9Y233 779 aa12.8□□□□□ -0.36
GTF3A-209ENST00000640289 A0A096LPK6 155 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms