RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 SLC15A1P46059 708 aa4.12□□□□□ -1.75
CCDC7-216ENST00000640058 MRPL12P52815 198 aaKnown RBP4.12□□□□□ -1.75
CCDC7-216ENST00000640058 DDX10Q13206 875 aaKnown RBP4.12□□□□□ -1.75
CCDC7-216ENST00000640058 DRP2Q13474 957 aa4.12□□□□□ -1.75
CCDC7-216ENST00000640058 FASTKD1Q53R41 847 aaKnown RBP4.12□□□□□ -1.75
CCDC7-216ENST00000640058 SPINK14Q6IE38 97 aa4.12□□□□□ -1.75
CCDC7-216ENST00000640058 SUSD1Q6UWL2 747 aa4.12□□□□□ -1.75
CCDC7-216ENST00000640058 P2RY8Q86VZ1 359 aa4.12□□□□□ -1.75
CCDC7-216ENST00000640058 HOGA1Q86XE5 327 aa4.12□□□□□ -1.75
CCDC7-216ENST00000640058 TMEM139Q8IV31 216 aa4.12□□□□□ -1.75
CCDC7-216ENST00000640058 CDK20Q8IZL9 346 aa4.12□□□□□ -1.75
CCDC7-216ENST00000640058 ARHGAP24Q8N264 748 aa4.12□□□□□ -1.75
CCDC7-216ENST00000640058 C1orf131Q8NDD1 294 aaKnown RBP4.12□□□□□ -1.75
CCDC7-216ENST00000640058 IRGQQ8WZA9 623 aa4.12□□□□□ -1.75
CCDC7-216ENST00000640058 ZNF300Q96RE9 604 aaPredicted RBP4.12□□□□□ -1.75
CCDC7-216ENST00000640058 PAFAH2Q99487 392 aa4.12□□□□□ -1.75
CCDC7-216ENST00000640058 DGCR6LQ9BY27 220 aa4.12□□□□□ -1.75
CCDC7-216ENST00000640058 ATP13A3Q9H7F0 1226 aa4.12□□□□□ -1.75
CCDC7-216ENST00000640058 ARHGEF38Q9NXL2 777 aa4.12□□□□□ -1.75
CCDC7-216ENST00000640058 ANKRD61A6NGH8 418 aa4.11□□□□□ -1.75
CCDC7-216ENST00000640058 VILLO15195 856 aa4.11□□□□□ -1.75
CCDC7-216ENST00000640058 PI15O43692 258 aa4.11□□□□□ -1.75
CCDC7-216ENST00000640058 NXPH2O95156 264 aa4.11□□□□□ -1.75
CCDC7-216ENST00000640058 GATA1P15976 413 aaPredicted RBP4.11□□□□□ -1.75
CCDC7-216ENST00000640058 CA6P23280 308 aa4.11□□□□□ -1.75
CCDC7-216ENST00000640058 NOVP48745 357 aa4.11□□□□□ -1.75
CCDC7-216ENST00000640058 CXCL9Q07325 125 aa4.11□□□□□ -1.75
CCDC7-216ENST00000640058 TMPRSS11FQ6ZWK6 438 aa4.11□□□□□ -1.75
CCDC7-216ENST00000640058 TBC1D1Q86TI0 1168 aaPredicted RBP4.11□□□□□ -1.75
CCDC7-216ENST00000640058 CEP57L1Q8IYX8 460 aa4.11□□□□□ -1.75
CCDC7-216ENST00000640058 NIPA2Q8N8Q9 360 aa4.11□□□□□ -1.75
CCDC7-216ENST00000640058 OR5AP2Q8NGF4 316 aa4.11□□□□□ -1.75
CCDC7-216ENST00000640058 EVI5LQ96CN4 794 aa4.11□□□□□ -1.75
CCDC7-216ENST00000640058 FNBP1Q96RU3 617 aa4.11□□□□□ -1.75
CCDC7-216ENST00000640058 LMF2Q9BU23 707 aaKnown RBP4.11□□□□□ -1.75
CCDC7-216ENST00000640058 SPATC1LQ9H0A9 340 aa4.11□□□□□ -1.75
CCDC7-216ENST00000640058 ERAP1Q9NZ08 941 aa4.11□□□□□ -1.75
CCDC7-216ENST00000640058 SEC63Q9UGP8 760 aaKnown RBP4.11□□□□□ -1.75
CCDC7-216ENST00000640058 ZNF148Q9UQR1 794 aa4.11□□□□□ -1.75
CCDC7-216ENST00000640058 MSGN1A6NI15 193 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 F5H0A9 414 aaPredicted RBP4.1□□□□□ -1.75
CCDC7-216ENST00000640058 CTDSP2O14595 271 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 PAPSS1O43252 624 aaPredicted RBP4.1□□□□□ -1.75
CCDC7-216ENST00000640058 TRIM49P0CI25 452 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 TRIM49CP0CI26 452 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 ACADSP16219 412 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 OPRL1P41146 370 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 CSRP3P50461 194 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 AIMP2Q13155 320 aaKnown RBP4.1□□□□□ -1.75
CCDC7-216ENST00000640058 NECTIN1Q15223 517 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 CTU2Q2VPK5 515 aaKnown RBP4.1□□□□□ -1.75
CCDC7-216ENST00000640058 ITPRIPL2Q3MIP1 535 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 SLC25A53Q5H9E4 307 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 LRRTM1Q86UE6 522 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 KIRREL3Q8IZU9 778 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 LSMEM2Q8N112 164 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 EID3Q8N140 333 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 AZIN2Q96A70 460 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 OMA1Q96E52 524 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 CDRT15Q96T59 188 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 PIGQQ9BRB3 760 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 URM1Q9BTM9 101 aaKnown RBP4.1□□□□□ -1.75
CCDC7-216ENST00000640058 MAK16Q9BXY0 300 aaKnown RBP4.1□□□□□ -1.75
CCDC7-216ENST00000640058 UPF3AQ9H1J1 476 aaKnown RBP4.1□□□□□ -1.75
CCDC7-216ENST00000640058 DAPK2Q9UIK4 370 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 ZNF215Q9UL58 517 aaPredicted RBP4.1□□□□□ -1.75
CCDC7-216ENST00000640058 GRIP1Q9Y3R0 1128 aa4.1□□□□□ -1.75
CCDC7-216ENST00000640058 MAGEC1O60732 1142 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 PRAMEF11O60813 436 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 ZSCAN5DPP0CG00 497 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 HOXC13P31276 330 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 MMP12P39900 470 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 ARSEP51690 589 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 SLC8A3P57103 927 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 SIRPAP78324 504 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 CDK3Q00526 305 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 UGP2Q16851 508 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 HLA-BQ31612 363 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 C2CD6Q53TS8 623 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 RAB41Q5JT25 222 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 TEX38Q6PEX7 206 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 RTN4RL2Q86UN3 420 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 PAPD5Q8NDF8 572 aaKnown RBP4.09□□□□□ -1.75
CCDC7-216ENST00000640058 OR11H4Q8NGC9 324 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 MOSPD2Q8NHP6 518 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 VANGL1Q8TAA9 524 aaPredicted RBP4.09□□□□□ -1.75
CCDC7-216ENST00000640058 ARHGAP45Q92619 1136 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 CENPTQ96BT3 561 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 BTBD10Q9BSF8 475 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 P4HTMQ9NXG6 502 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 B3GAT1Q9P2W7 334 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 PPP1R3CQ9UQK1 317 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 MOB4Q9Y3A3 225 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 ZHX2Q9Y6X8 837 aa4.09□□□□□ -1.75
CCDC7-216ENST00000640058 OR10H2O60403 315 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 MED24O75448 989 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 DFFBO76075 338 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 WDPCPO95876 746 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 BCL10O95999 233 aa4.08□□□□□ -1.76
CCDC7-216ENST00000640058 GATA2P23769 480 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms