RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 UNC5AQ6ZN44 842 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 HOOK3Q86VS8 718 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 GPR135Q8IZ08 494 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 PSMG3-AS1Q96PY0 264 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 OR2A14Q96R47 310 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 NUDT9Q9BW91 350 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 SPHK1Q9NYA1 384 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 VPS4AQ9UN37 437 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 ZNF451Q9Y4E5 1061 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 ICE1Q9Y2F5 2266 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 A0A0U1RQJ8 604 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 CCDC162PA2VCL2 907 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 BLACEA4D250 179 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 A6NL46 340 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 MIF4GDA9UHW6 222 aaKnown RBP16.29■□□□□ 0.2
SMN2-216ENST00000638794 H3BMH7 237 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 QSOX1O00391 747 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 ZNF185O15231 689 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 PSMD3O43242 534 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 FTH1P02794 183 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 HBQ1P09105 142 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 TPBGLP0DKB5 382 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 AGXTP21549 392 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 GNLYP22749 145 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 ESPL1Q14674 2120 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 ZIC1Q15915 447 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 TBC1D21Q8IYX1 336 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 SYCE1Q8N0S2 351 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 TMEM102Q8N9M5 508 aaPredicted RBP16.29■□□□□ 0.2
SMN2-216ENST00000638794 GALNT11Q8NCW6 608 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 OR52K1Q8NGK4 314 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 FLVCR1-AS1Q8TAF5 88 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 N4BP2L2Q92802 583 aaPredicted RBP16.29■□□□□ 0.2
SMN2-216ENST00000638794 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMN2-216ENST00000638794 TCTN2Q96GX1 697 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 TDRKHQ9Y2W6 561 aaKnown RBP16.29■□□□□ 0.2
SMN2-216ENST00000638794 PCDHGB7Q9Y5F8 929 aa16.29■□□□□ 0.2
SMN2-216ENST00000638794 SLC5A10A0PJK1 596 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 BHMG1C9JSJ3 638 aaPredicted RBP16.28■□□□□ 0.2
SMN2-216ENST00000638794 KLF7O75840 302 aaPredicted RBP16.28■□□□□ 0.2
SMN2-216ENST00000638794 OR2B3O76000 313 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 CHRM5P08912 532 aaPredicted RBP16.28■□□□□ 0.2
SMN2-216ENST00000638794 CBSLP0DN79 551 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 CBSP35520 551 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 GABRA4P48169 554 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 RRADP55042 308 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 SYTL3Q4VX76 610 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 MED25Q71SY5 747 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 LINC00523Q86TU6 105 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 RAB43Q86YS6 212 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 OR13J1Q8NGT2 312 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 OR5K2Q8NHB8 316 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 ATG4AQ8WYN0 398 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 CHRNA10Q9GZZ6 450 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 SPRTNQ9H040 489 aaPredicted RBP16.28■□□□□ 0.2
SMN2-216ENST00000638794 OR6C2Q9NZP2 312 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 LUZP4Q9P127 313 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 POLG2Q9UHN1 485 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 PLAGL1Q9UM63 463 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 PADI2Q9Y2J8 665 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 MAP4K5Q9Y4K4 846 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 ANKRD12Q6UB98 2062 aa16.28■□□□□ 0.2
SMN2-216ENST00000638794 A0A0J9YY10 115 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 OR1I1O60431 355 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 DPM1O60762 260 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 CTSBP07858 339 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 OR56A5P0C7T3 313 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 OTX2P32243 289 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 KIF5AQ12840 1032 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 CDH17Q12864 832 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 RAPSNQ13702 412 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 PRR30Q53SZ7 412 aaPredicted RBP16.27■□□□□ 0.2
SMN2-216ENST00000638794 C1orf189Q5VU69 101 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 MLIPQ5VWP3 458 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 RHBDD2Q6NTF9 364 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 JMJD6Q6NYC1 403 aaPredicted RBP16.27■□□□□ 0.2
SMN2-216ENST00000638794 TMEM139Q8IV31 216 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 DNAAF3Q8N9W5 541 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 Q8NA96 180 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 GLIS1Q8NBF1 620 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 HDAC10Q969S8 669 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 GBP5Q96PP8 586 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 BAG1Q99933 345 aaPredicted RBP16.27■□□□□ 0.2
SMN2-216ENST00000638794 DESI2Q9BSY9 194 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 DHRS4Q9BTZ2 278 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 MFRPQ9BY79 579 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 RBSNQ9H1K0 784 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 GPR83Q9NYM4 423 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 IMPACTQ9P2X3 320 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 SLC2A6Q9UGQ3 507 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 G3BP2Q9UN86 482 aaKnown RBP16.27■□□□□ 0.2
SMN2-216ENST00000638794 AP1M2Q9Y6Q5 423 aa16.27■□□□□ 0.2
SMN2-216ENST00000638794 HEATR9A2RTY3 570 aa16.26■□□□□ 0.19
SMN2-216ENST00000638794 ERI2A8K979 691 aaKnown RBP16.26■□□□□ 0.19
SMN2-216ENST00000638794 ZSCAN9O15535 394 aaPredicted RBP16.26■□□□□ 0.19
SMN2-216ENST00000638794 ATXN8OSP0DMR3 200 aa16.26■□□□□ 0.19
SMN2-216ENST00000638794 PEBP1P30086 187 aaKnown RBP16.26■□□□□ 0.19
SMN2-216ENST00000638794 CSE1LP55060 971 aaKnown RBP16.26■□□□□ 0.19
SMN2-216ENST00000638794 PLOD1Q02809 727 aaPredicted RBP16.26■□□□□ 0.19
SMN2-216ENST00000638794 MRGPREQ86SM8 312 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms