RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 SDCCAG8Q86SQ7 713 aaPredicted RBP18.35■□□□□ 0.53
CLN6-221ENST00000637494 LRRC6Q86X45 466 aa18.35■□□□□ 0.53
CLN6-221ENST00000637494 PTRH1Q86Y79 214 aaKnown RBP18.35■□□□□ 0.53
CLN6-221ENST00000637494 C19orf47Q8N9M1 422 aaKnown RBP18.35■□□□□ 0.53
CLN6-221ENST00000637494 THAP4Q8WY91 577 aa18.35■□□□□ 0.53
CLN6-221ENST00000637494 ABHD17AQ96GS6 310 aa18.35■□□□□ 0.53
CLN6-221ENST00000637494 AP1M1Q9BXS5 423 aa18.35■□□□□ 0.53
CLN6-221ENST00000637494 KLHL25Q9H0H3 589 aa18.35■□□□□ 0.53
CLN6-221ENST00000637494 MRFAP1Q9Y605 127 aa18.35■□□□□ 0.53
CLN6-221ENST00000637494 ISM1B1AKI9 464 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 BHMG1C9JSJ3 638 aaPredicted RBP18.34■□□□□ 0.53
CLN6-221ENST00000637494 MEN1O00255 615 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 RFPL1O75677 317 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 PVRP15151 417 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 UGT2B7P16662 529 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 TPSB2P20231 275 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 CCR7P32248 378 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 CRADDP78560 199 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 KCNC4Q03721 635 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 GPS2Q13227 327 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 SEMA3AQ14563 771 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 KIR2DS3Q14952 304 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 TPSAB1Q15661 275 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 MRNIPQ6NTE8 343 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 LRRC8BQ6P9F7 803 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 SLC22A15Q8IZD6 547 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 DSELQ8IZU8 1212 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 OR1L3Q8NH93 324 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 CFAP61Q8NHU2 1237 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 NAP1L3Q99457 506 aaPredicted RBP18.34■□□□□ 0.53
CLN6-221ENST00000637494 DPH2Q9BQC3 489 aaPredicted RBP18.34■□□□□ 0.53
CLN6-221ENST00000637494 ZNF71Q9NQZ8 489 aaPredicted RBP18.34■□□□□ 0.53
CLN6-221ENST00000637494 ANAPC2Q9UJX6 822 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 JRKLQ9Y4A0 524 aa18.34■□□□□ 0.53
CLN6-221ENST00000637494 GCN1Q92616 2671 aaKnown RBP18.34■□□□□ 0.53
CLN6-221ENST00000637494 PIEZO2Q9H5I5 2752 aa18.33■□□□□ 0.53
CLN6-221ENST00000637494 A0A0J9YY10 115 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 WISP1O95388 367 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 RAB40ALP0C0E4 278 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 PAMP19021 973 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 AGXTP21549 392 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 MGAT1P26572 445 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 UGT8Q16880 541 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 SLC5A12Q1EHB4 618 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 IZUMO3Q5VZ72 239 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 UNC5DQ6UXZ4 953 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 LDB1Q86U70 411 aaPredicted RBP18.33■□□□□ 0.52
CLN6-221ENST00000637494 RAB42Q8N4Z0 105 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 SKA2Q8WVK7 121 aaPredicted RBP18.33■□□□□ 0.52
CLN6-221ENST00000637494 SLC22A18Q96BI1 424 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 PBKQ96KB5 322 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 OR2A14Q96R47 310 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 C17orf62Q9BQA9 187 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 CHST8Q9H2A9 424 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 CLMPQ9H6B4 373 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 AKIRIN1Q9H9L7 192 aaPredicted RBP18.33■□□□□ 0.52
CLN6-221ENST00000637494 MRM3Q9HC36 420 aaKnown RBP18.33■□□□□ 0.52
CLN6-221ENST00000637494 TREX1Q9NSU2 369 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 IRAK4Q9NWZ3 460 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 SAMD15Q9P1V8 674 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 SLC39A10Q9ULF5 831 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 TTC7AQ9ULT0 858 aaPredicted RBP18.33■□□□□ 0.52
CLN6-221ENST00000637494 SNX7Q9UNH6 387 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 AP1M2Q9Y6Q5 423 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 ZNF462Q96JM2 2506 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 PIKFYVEQ9Y2I7 2098 aa18.33■□□□□ 0.52
CLN6-221ENST00000637494 C9J4A7 227 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 FURINP09958 794 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 NMBRP28336 390 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 CSRP3P50461 194 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 RAB28P51157 221 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 PMS2P54278 862 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 ABRQ12979 859 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 GPS1Q13098 491 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 TRIP13Q15645 432 aaPredicted RBP18.32■□□□□ 0.52
CLN6-221ENST00000637494 PLEKHS1Q5SXH7 462 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 RNF187Q5TA31 235 aaPredicted RBP18.32■□□□□ 0.52
CLN6-221ENST00000637494 ARMC3Q5W041 872 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 CDHR3Q6ZTQ4 885 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 OTOAQ7RTW8 1153 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 TRIM73Q86UV7 250 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 DCUN1D3Q8IWE4 304 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 SYTL1Q8IYJ3 562 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 FOPNLQ96NB1 174 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 NRTNQ99748 197 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 RAB11FIP5Q9BXF6 653 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 NLNQ9BYT8 704 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 TRIM4Q9C037 500 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 PLAGL1Q9UM63 463 aa18.32■□□□□ 0.52
CLN6-221ENST00000637494 IQCF5A8MTL0 148 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 ZNF749O43361 778 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 GPC4O75487 556 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 OR2B3O76000 313 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 VAPBO95292 243 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 ZIC2O95409 532 aaPredicted RBP18.31■□□□□ 0.52
CLN6-221ENST00000637494 KRT14P02533 472 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 RPS3P23396 243 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLN6-221ENST00000637494 AOAHP28039 575 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 PKLRP30613 574 aa18.31■□□□□ 0.52
CLN6-221ENST00000637494 VPS41P49754 854 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms