RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 TMEM102Q8N9M5 508 aaPredicted RBP17.85■□□□□ 0.45
CLN6-220ENST00000637450 GALNT11Q8NCW6 608 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 FDCSPQ8NFU4 85 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 ELMO1Q92556 727 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 TCTN2Q96GX1 697 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 CHRNA10Q9GZZ6 450 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 VPS4AQ9UN37 437 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 PRRC2CQ9Y520 2896 aaKnown RBP17.85■□□□□ 0.45
CLN6-220ENST00000637450 CCDC162PA2VCL2 907 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 BHMG1C9JSJ3 638 aaPredicted RBP17.84■□□□□ 0.45
CLN6-220ENST00000637450 ZNF185O15231 689 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 SORBS2O94875 1100 aaKnown RBP17.84■□□□□ 0.45
CLN6-220ENST00000637450 FTCDO95954 541 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 CHRM5P08912 532 aaPredicted RBP17.84■□□□□ 0.45
CLN6-220ENST00000637450 GABRA4P48169 554 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 PLOD1Q02809 727 aaPredicted RBP17.84■□□□□ 0.45
CLN6-220ENST00000637450 CCDC38Q502W7 563 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 NAPRTQ6XQN6 538 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 TRIM73Q86UV7 250 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 EFCAB3Q8N7B9 438 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 GLIS1Q8NBF1 620 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 OR52K1Q8NGK4 314 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 OR13J1Q8NGT2 312 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 OR5K2Q8NHB8 316 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 FLVCR1-AS1Q8TAF5 88 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 BAG1Q99933 345 aaPredicted RBP17.84■□□□□ 0.45
CLN6-220ENST00000637450 DHRS4Q9BTZ2 278 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 SPRTNQ9H040 489 aaPredicted RBP17.84■□□□□ 0.45
CLN6-220ENST00000637450 RBSNQ9H1K0 784 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 SPHK1Q9NYA1 384 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 OR6C2Q9NZP2 312 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 MAP4K5Q9Y4K4 846 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 AP1M2Q9Y6Q5 423 aa17.84■□□□□ 0.45
CLN6-220ENST00000637450 A0A0U1RQJ8 604 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 ERI2A8K979 691 aaKnown RBP17.83■□□□□ 0.44
CLN6-220ENST00000637450 C9J4A7 227 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 HCRTR1O43613 425 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 KLF7O75840 302 aaPredicted RBP17.83■□□□□ 0.44
CLN6-220ENST00000637450 OR2B3O76000 313 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 OR56A5P0C7T3 313 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 CBSLP0DN79 551 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 STIP1P31948 543 aaKnown RBP17.83■□□□□ 0.44
CLN6-220ENST00000637450 CBSP35520 551 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 UQCRFS1P47985 274 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 RRADP55042 308 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 KIF5AQ12840 1032 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 CDH17Q12864 832 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 LYPLAL1Q5VWZ2 237 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 RHBDD2Q6NTF9 364 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 TMEM139Q8IV31 216 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 DNAAF3Q8N9W5 541 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 N4BP2L2Q92802 583 aaPredicted RBP17.83■□□□□ 0.44
CLN6-220ENST00000637450 HDAC10Q969S8 669 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 HES6Q96HZ4 224 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 NUDT9Q9BW91 350 aa17.83■□□□□ 0.44
CLN6-220ENST00000637450 TDRKHQ9Y2W6 561 aaKnown RBP17.83■□□□□ 0.44
CLN6-220ENST00000637450 A0A0J9YY10 115 aa17.82■□□□□ 0.44
CLN6-220ENST00000637450 A6NL46 340 aa17.82■□□□□ 0.44
CLN6-220ENST00000637450 OR1I1O60431 355 aa17.82■□□□□ 0.44
CLN6-220ENST00000637450 DPM1O60762 260 aa17.82■□□□□ 0.44
CLN6-220ENST00000637450 SUN1O94901 812 aa17.82■□□□□ 0.44
CLN6-220ENST00000637450 GNLYP22749 145 aa17.82■□□□□ 0.44
CLN6-220ENST00000637450 ATP1A4Q13733 1029 aa17.82■□□□□ 0.44
CLN6-220ENST00000637450 SSPNQ14714 243 aa17.82■□□□□ 0.44
CLN6-220ENST00000637450 JMJD6Q6NYC1 403 aaPredicted RBP17.82■□□□□ 0.44
CLN6-220ENST00000637450 RAB43Q86YS6 212 aa17.82■□□□□ 0.44
CLN6-220ENST00000637450 HPS6Q86YV9 775 aa17.82■□□□□ 0.44
CLN6-220ENST00000637450 C17orf62Q9BQA9 187 aa17.82■□□□□ 0.44
CLN6-220ENST00000637450 ETNK1Q9HBU6 452 aa17.82■□□□□ 0.44
CLN6-220ENST00000637450 SLC2A6Q9UGQ3 507 aa17.82■□□□□ 0.44
CLN6-220ENST00000637450 RIMKLBQ9ULI2 386 aa17.82■□□□□ 0.44
CLN6-220ENST00000637450 G3BP2Q9UN86 482 aaKnown RBP17.82■□□□□ 0.44
CLN6-220ENST00000637450 PADI2Q9Y2J8 665 aa17.82■□□□□ 0.44
CLN6-220ENST00000637450 SPTAN1Q13813 2472 aaKnown RBP17.81■□□□□ 0.44
CLN6-220ENST00000637450 TNRC6AQ8NDV7 1962 aaKnown RBP17.81■□□□□ 0.44
CLN6-220ENST00000637450 HEATR9A2RTY3 570 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 BLACEA4D250 179 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 GAS8O95995 478 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 GOT2P00505 430 aaKnown RBP17.81■□□□□ 0.44
CLN6-220ENST00000637450 CTSBP07858 339 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 OASLQ15646 514 aaKnown RBP17.81■□□□□ 0.44
CLN6-220ENST00000637450 INPP5JQ15735 1006 aaPredicted RBP17.81■□□□□ 0.44
CLN6-220ENST00000637450 SLC5A12Q1EHB4 618 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 DEFB110Q30KQ9 67 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 SYTL3Q4VX76 610 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 TSTD2Q5T7W7 516 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 MLIPQ5VWP3 458 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 TXLNBQ8N3L3 684 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 DNAJC22Q8N4W6 341 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 PROKR1Q8TCW9 393 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 ATG4AQ8WYN0 398 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 IP6K3Q96PC2 410 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 GBP5Q96PP8 586 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 RANBP9Q96S59 729 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 TTC1Q99614 292 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 SMAD5Q99717 465 aaKnown RBP17.81■□□□□ 0.44
CLN6-220ENST00000637450 GPR83Q9NYM4 423 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 PLAGL1Q9UM63 463 aa17.81■□□□□ 0.44
CLN6-220ENST00000637450 UTP20O75691 2785 aaKnown RBP17.8■□□□□ 0.44
CLN6-220ENST00000637450 LIASO43766 372 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms