RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 POLR2EP19388 210 aaKnown RBP11.86□□□□□ -0.51
CLN8-212ENST00000637083 GGT1P19440 569 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 LHCGRP22888 699 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 MYF6P23409 242 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 PRPH2P23942 346 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 OXTRP30559 389 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 VIPR1P32241 457 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 MAPK9P45984 424 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 EPHA5P54756 1037 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 DCDC1P59894 354 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 CHRNB3Q05901 458 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 HSPA14Q0VDF9 509 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 GBX1Q14549 363 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 NADK2Q4G0N4 442 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 KCTD21Q4G0X4 260 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 TMEM25Q86YD3 366 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 RGL4Q8IZJ4 473 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 LIX1Q8N485 282 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 ITFG1Q8TB96 612 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 SKA2Q8WVK7 121 aaPredicted RBP11.86□□□□□ -0.51
CLN8-212ENST00000637083 HBEGFQ99075 208 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 FAM83DQ9H4H8 585 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 CLMPQ9H6B4 373 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 CAAP1Q9H8G2 361 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 GORASP2Q9H8Y8 452 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 SPHK2Q9NRA0 654 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 TDP1Q9NUW8 608 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 PDE10AQ9Y233 779 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 LAMA3Q16787 3333 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 DENND4CQ5VZ89 1909 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 SERTM1A2A2V5 107 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 KIAA0355O15063 1070 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 ERN1O75460 977 aaKnown RBP11.85□□□□□ -0.51
CLN8-212ENST00000637083 ACPPP15309 386 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 ZNF23P17027 643 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 OR4D2P58180 307 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 GK3PQ14409 553 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 THEMIS2Q5TEJ8 643 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 RBM44Q6ZP01 1051 aaKnown RBP11.85□□□□□ -0.51
CLN8-212ENST00000637083 OTOP2Q7RTS6 562 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 KLHL23Q8NBE8 558 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 OR2T12Q8NG77 320 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 OR52E4Q8NGH9 312 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 HCAR2Q8TDS4 363 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 ASZ1Q8WWH4 475 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 SELENOMQ8WWX9 145 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 ASB11Q8WXH4 323 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 PAWRQ96IZ0 340 aaKnown RBP11.85□□□□□ -0.51
CLN8-212ENST00000637083 LRIG1Q96JA1 1093 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 RNF145Q96MT1 663 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 TCF25Q9BQ70 676 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 THUMPD3Q9BV44 507 aaKnown RBP11.85□□□□□ -0.51
CLN8-212ENST00000637083 CHID1Q9BWS9 393 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 GRIP2Q9C0E4 1043 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 RPF2Q9H7B2 306 aaKnown RBP11.85□□□□□ -0.51
CLN8-212ENST00000637083 SMPD3Q9NY59 655 aaPredicted RBP11.85□□□□□ -0.51
CLN8-212ENST00000637083 PTTG2Q9NZH5 202 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 NFKBIL1Q9UBC1 381 aaPredicted RBP11.85□□□□□ -0.51
CLN8-212ENST00000637083 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.85□□□□□ -0.51
CLN8-212ENST00000637083 OAZ3Q9UMX2 235 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 AK5Q9Y6K8 562 aa11.85□□□□□ -0.51
CLN8-212ENST00000637083 A0A087WXM4 84 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 FAM149AA5PLN7 773 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 CCDC160A6NGH7 325 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 NPIPB8E9PQR5 432 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 SLC9A3R1O14745 358 aaPredicted RBP11.84□□□□□ -0.51
CLN8-212ENST00000637083 SCELO95171 688 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 PGRP06401 933 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 BMP1P13497 986 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 XPAP23025 273 aaPredicted RBP11.84□□□□□ -0.51
CLN8-212ENST00000637083 HRH2P25021 359 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 DGKQP52824 942 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 CLDN8P56748 225 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 RPS14P62263 151 aaKnown RBP11.84□□□□□ -0.51
CLN8-212ENST00000637083 HTRA4P83105 476 aaPredicted RBP11.84□□□□□ -0.51
CLN8-212ENST00000637083 B4GALNT1Q00973 533 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 HMGCS1Q01581 520 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 CYP4F3Q08477 520 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 FAM174BQ3ZCQ3 159 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 SLC36A3Q495N2 470 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLN8-212ENST00000637083 USP39Q53GS9 565 aaKnown RBP11.84□□□□□ -0.51
CLN8-212ENST00000637083 SGO1Q5FBB7 561 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 B3GNT6Q6ZMB0 384 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 DHRSXQ8N5I4 330 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 L3MBTL4Q8NA19 623 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 BPIFB1Q8TDL5 484 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 GTF2H4Q92759 462 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 CLP1Q92989 425 aaKnown RBP11.84□□□□□ -0.51
CLN8-212ENST00000637083 CMTM7Q96FZ5 175 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 SEPHS2Q99611 448 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 SH3GL3Q99963 347 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 ZSCAN5AQ9BUG6 496 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 YTHDF1Q9BYJ9 559 aaKnown RBP11.84□□□□□ -0.51
CLN8-212ENST00000637083 TRIM8Q9BZR9 551 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 SMG9Q9H0W8 520 aaKnown RBP11.84□□□□□ -0.51
CLN8-212ENST00000637083 C11orf49Q9H6J7 331 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 DNAJC11Q9NVH1 559 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 INSL6Q9Y581 213 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 GFYI3L273 518 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms