RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 PVRP15151 417 aa17.35■□□□□ 0.37
PNKP-225ENST00000636214 AGXTP21549 392 aa17.35■□□□□ 0.37
PNKP-225ENST00000636214 SESN2P58004 480 aaPredicted RBP17.35■□□□□ 0.37
PNKP-225ENST00000636214 ABRQ12979 859 aa17.35■□□□□ 0.37
PNKP-225ENST00000636214 CCNG2Q16589 344 aa17.35■□□□□ 0.37
PNKP-225ENST00000636214 DNAJC21Q5F1R6 531 aaKnown RBP17.35■□□□□ 0.37
PNKP-225ENST00000636214 IZUMO3Q5VZ72 239 aa17.35■□□□□ 0.37
PNKP-225ENST00000636214 UNC5AQ6ZN44 842 aa17.35■□□□□ 0.37
PNKP-225ENST00000636214 ASB18Q6ZVZ8 466 aa17.35■□□□□ 0.37
PNKP-225ENST00000636214 SYTL1Q8IYJ3 562 aa17.35■□□□□ 0.37
PNKP-225ENST00000636214 ENDOVQ8N8Q3 282 aaKnown RBP17.35■□□□□ 0.37
PNKP-225ENST00000636214 OR1L3Q8NH93 324 aa17.35■□□□□ 0.37
PNKP-225ENST00000636214 TCTN2Q96GX1 697 aa17.35■□□□□ 0.37
PNKP-225ENST00000636214 RUFY1Q96T51 708 aa17.35■□□□□ 0.37
PNKP-225ENST00000636214 AKIRIN1Q9H9L7 192 aaPredicted RBP17.35■□□□□ 0.37
PNKP-225ENST00000636214 CATSPERZQ9NTU4 200 aa17.35■□□□□ 0.37
PNKP-225ENST00000636214 BFARQ9NZS9 450 aa17.35■□□□□ 0.37
PNKP-225ENST00000636214 TLK1Q9UKI8 766 aa17.35■□□□□ 0.37
PNKP-225ENST00000636214 SLC5A10A0PJK1 596 aa17.34■□□□□ 0.37
PNKP-225ENST00000636214 CHRM5P08912 532 aaPredicted RBP17.34■□□□□ 0.37
PNKP-225ENST00000636214 RAB40ALP0C0E4 278 aa17.34■□□□□ 0.37
PNKP-225ENST00000636214 UGT2B7P16662 529 aa17.34■□□□□ 0.37
PNKP-225ENST00000636214 GRIA1P42261 906 aa17.34■□□□□ 0.37
PNKP-225ENST00000636214 TTPAP49638 278 aa17.34■□□□□ 0.37
PNKP-225ENST00000636214 HSPA14Q0VDF9 509 aa17.34■□□□□ 0.37
PNKP-225ENST00000636214 PCID2Q5JVF3 399 aa17.34■□□□□ 0.37
PNKP-225ENST00000636214 PLEKHS1Q5SXH7 462 aa17.34■□□□□ 0.37
PNKP-225ENST00000636214 PRAMEF17Q5VTA0 474 aa17.34■□□□□ 0.37
PNKP-225ENST00000636214 NAPRTQ6XQN6 538 aa17.34■□□□□ 0.37
PNKP-225ENST00000636214 APLFQ8IW19 511 aaPredicted RBP17.34■□□□□ 0.37
PNKP-225ENST00000636214 ASZ1Q8WWH4 475 aa17.34■□□□□ 0.37
PNKP-225ENST00000636214 C17orf62Q9BQA9 187 aa17.34■□□□□ 0.37
PNKP-225ENST00000636214 DPH2Q9BQC3 489 aaPredicted RBP17.34■□□□□ 0.37
PNKP-225ENST00000636214 NLNQ9BYT8 704 aa17.34■□□□□ 0.37
PNKP-225ENST00000636214 EIF2B3Q9NR50 452 aaKnown RBP17.34■□□□□ 0.37
PNKP-225ENST00000636214 PADI2Q9Y2J8 665 aa17.34■□□□□ 0.37
PNKP-225ENST00000636214 ZKSCAN5Q9Y2L8 839 aa17.34■□□□□ 0.37
PNKP-225ENST00000636214 A0A0J9YY10 115 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 ARGFXA6NJG6 315 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 ISM1B1AKI9 464 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 FGGP02679 453 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 ACADLP28330 430 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 ACVR1Q04771 509 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 PTRHD1Q6GMV3 140 aaKnown RBP17.33■□□□□ 0.36
PNKP-225ENST00000636214 TTC23LQ6PF05 361 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 DRICH1Q6PGQ1 229 aaPredicted RBP17.33■□□□□ 0.36
PNKP-225ENST00000636214 CDHR3Q6ZTQ4 885 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 PRUNE1Q86TP1 453 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 TRIM73Q86UV7 250 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 TRIM58Q8NG06 486 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 CFAP61Q8NHU2 1237 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 PANX3Q96QZ0 392 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 IL22Q9GZX6 179 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 HOMER3Q9NSC5 361 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 GPN3Q9UHW5 284 aaPredicted RBP17.33■□□□□ 0.36
PNKP-225ENST00000636214 GNPTGQ9UJJ9 305 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 PLAGL1Q9UM63 463 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 DRG1Q9Y295 367 aaKnown RBP17.33■□□□□ 0.36
PNKP-225ENST00000636214 AP1M2Q9Y6Q5 423 aa17.33■□□□□ 0.36
PNKP-225ENST00000636214 PRMT5O14744 637 aaPredicted RBP17.32■□□□□ 0.36
PNKP-225ENST00000636214 PFDN6O15212 129 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 ZNF749O43361 778 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 CEP104O60308 925 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 OR2B3O76000 313 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 ZSCAN5DPP0CG00 497 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 NR1D1P20393 614 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 RPL22P35268 128 aaKnown RBP17.32■□□□□ 0.36
PNKP-225ENST00000636214 IL10RAQ13651 578 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 KIR2DS3Q14952 304 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 PTCHD3Q3KNS1 767 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 ZNF517Q6ZMY9 492 aaPredicted RBP17.32■□□□□ 0.36
PNKP-225ENST00000636214 RAB43Q86YS6 212 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 SLC38A9Q8NBW4 561 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 SKA2Q8WVK7 121 aaPredicted RBP17.32■□□□□ 0.36
PNKP-225ENST00000636214 ZNF778Q96MU6 729 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 OR2A14Q96R47 310 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 NRTNQ99748 197 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 SLC25A23Q9BV35 468 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 CARD6Q9BX69 1037 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 CHRAC1Q9NRG0 131 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 TXLNGQ9NUQ3 528 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 PCMTD2Q9NV79 361 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 TCFL5Q9UL49 500 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 SLC39A10Q9ULF5 831 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 MRFAP1Q9Y605 127 aa17.32■□□□□ 0.36
PNKP-225ENST00000636214 HECTD1Q9ULT8 2610 aa17.31■□□□□ 0.36
PNKP-225ENST00000636214 BHMG1C9JSJ3 638 aaPredicted RBP17.31■□□□□ 0.36
PNKP-225ENST00000636214 CD3EAPO15446 510 aaKnown RBP17.31■□□□□ 0.36
PNKP-225ENST00000636214 NDUFS3O75489 264 aa17.31■□□□□ 0.36
PNKP-225ENST00000636214 DNAJB5O75953 348 aa17.31■□□□□ 0.36
PNKP-225ENST00000636214 RORAP35398 523 aa17.31■□□□□ 0.36
PNKP-225ENST00000636214 NPY2RP49146 381 aa17.31■□□□□ 0.36
PNKP-225ENST00000636214 RAB28P51157 221 aa17.31■□□□□ 0.36
PNKP-225ENST00000636214 CCL11P51671 97 aa17.31■□□□□ 0.36
PNKP-225ENST00000636214 PGDP52209 483 aa17.31■□□□□ 0.36
PNKP-225ENST00000636214 SARNPP82979 210 aaKnown RBP17.31■□□□□ 0.36
PNKP-225ENST00000636214 NCF4Q15080 339 aa17.31■□□□□ 0.36
PNKP-225ENST00000636214 SLC5A12Q1EHB4 618 aa17.31■□□□□ 0.36
PNKP-225ENST00000636214 DEFB110Q30KQ9 67 aa17.31■□□□□ 0.36
PNKP-225ENST00000636214 ZNF534Q76KX8 674 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms