RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ANKRD26P1Q6NSI1 321 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 CATSPERGQ6ZRH7 1159 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ARHGAP22Q7Z5H3 698 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 NXPE1Q8N323 547 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 C7orf57Q8NEG2 295 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 OR5M3Q8NGP4 307 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF570Q96NI8 536 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 RNF157Q96PX1 679 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 TRMT61BQ9BVS5 477 aaKnown RBP5.47□□□□□ -1.53
SCN1A-209ENST00000635750 ABCB9Q9NP78 766 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 PLK2Q9NYY3 685 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 KCNN3Q9UGI6 736 aa5.47□□□□□ -1.53
SCN1A-209ENST00000635750 LRRIQ1Q96JM4 1722 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 A0A0J9YYE9 177 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 FAM227AF5H4B4 570 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 M0R036 132 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 CSN2P05814 226 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 IFNGR1P15260 489 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 CD40LGP29965 261 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF84P51523 738 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 RPS3AP61247 264 aaKnown RBP5.46□□□□□ -1.53
SCN1A-209ENST00000635750 SCN1BQ07699 218 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 SEMA5AQ13591 1074 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 RUNX2Q13950 521 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 BORAQ6PGQ7 559 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 ZC3H14Q6PJT7 736 aaKnown RBP5.46□□□□□ -1.53
SCN1A-209ENST00000635750 NPNTQ6UXI9 565 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 C6orf120Q7Z4R8 191 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 PIGZQ86VD9 579 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 NPAS4Q8IUM7 802 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 SPAG16Q8N0X2 631 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 ANKK1Q8NFD2 765 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 OR4K2Q8NGD2 314 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 GATAD2BQ8WXI9 593 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 RGMAQ96B86 450 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 ZBTB45Q96K62 511 aaPredicted RBP5.46□□□□□ -1.53
SCN1A-209ENST00000635750 NPAS2Q99743 824 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 SNRNP25Q9BV90 132 aaKnown RBP5.46□□□□□ -1.53
SCN1A-209ENST00000635750 SEMA6BQ9H3T3 888 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 PRPF19Q9UMS4 504 aaKnown RBP5.46□□□□□ -1.53
SCN1A-209ENST00000635750 PLCL2Q9UPR0 1127 aa5.46□□□□□ -1.53
SCN1A-209ENST00000635750 INO80Q9ULG1 1556 aaPredicted RBP5.46□□□□□ -1.53
SCN1A-209ENST00000635750 DAPL1A0PJW8 107 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 CIB4A0PJX0 185 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 A8MUA0 341 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 MT-CYBP00156 380 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-209ENST00000635750 PRKD1Q15139 912 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-209ENST00000635750 ALDH16A1Q8IZ83 802 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 PARP8Q8N3A8 854 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 NATD1Q8N6N6 113 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 CD99L2Q8TCZ2 262 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 KCTD4Q8WVF5 259 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 APOLD1Q96LR9 279 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 LGMNQ99538 433 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 WDR77Q9BQA1 342 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-209ENST00000635750 CORO1CQ9ULV4 474 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-209ENST00000635750 U3KQV3 271 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 BICRAQ9NZM4 1560 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 ADGRB3O60242 1522 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 ZNF521Q96K83 1311 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 PRAMEF33A0A0G2JMD5 474 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-209ENST00000635750 ACOT7O00154 380 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 TPST2O60704 377 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 PRAMEF10O60809 474 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 VNN2O95498 520 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 NPR2P20594 1047 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 GDI1P31150 447 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 PIK3CBP42338 1070 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 CTBP1Q13363 440 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 ITPK1Q13572 414 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 GPR107Q5VW38 600 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 DHDDSQ86SQ9 333 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 NOA1Q8NC60 698 aaKnown RBP5.46□□□□□ -1.54
SCN1A-209ENST00000635750 OR6N1Q8NGY5 312 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 LMX1AQ8TE12 382 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 TOP1MTQ969P6 601 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 UBXN10Q96LJ8 280 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 CDT1Q9H211 546 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 HIPK2Q9H2X6 1198 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 RIOX1Q9H6W3 641 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 NOL11Q9H8H0 719 aaKnown RBP5.46□□□□□ -1.54
SCN1A-209ENST00000635750 EVLQ9UI08 416 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-209ENST00000635750 RIMS1Q86UR5 1692 aaKnown RBP5.46□□□□□ -1.54
SCN1A-209ENST00000635750 FBP2O00757 339 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 ORC5O43913 435 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 PRAMEF1O95521 474 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 SERPINA6P08185 405 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 MALLQ13021 153 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 USF2Q15853 346 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-209ENST00000635750 C2orf27AQ580R0 203 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 PRPF38BQ5VTL8 546 aaKnown RBP5.46□□□□□ -1.54
SCN1A-209ENST00000635750 RHBDF2Q6PJF5 856 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 FOXR2Q6PJQ5 311 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 C3P1Q6ZMU1 363 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 ADGRD2Q7Z7M1 963 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 MAP4K3Q8IVH8 894 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 GCDHQ92947 438 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-209ENST00000635750 MR1Q95460 341 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 TSSK3Q96PN8 268 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms