RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 EBLN1P0CF75 366 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 ACRV1P26436 265 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 PIGAP37287 484 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 CSKP41240 450 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 PHEXP78562 749 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 PPP2R2BQ00005 443 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 PIGFQ07326 219 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 BCL2L1Q07817 233 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 SREBF2Q12772 1141 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 NFATC2Q13469 925 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 TOP3AQ13472 1001 aaPredicted RBP10.48□□□□□ -0.73
PSPC1-207ENST00000635251 CDH18Q13634 790 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 CBX2Q14781 532 aaPredicted RBP10.48□□□□□ -0.73
PSPC1-207ENST00000635251 SUSD1Q6UWL2 747 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 LRRC8DQ7L1W4 858 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 GALNT13Q8IUC8 556 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 MSRB3Q8IXL7 192 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 CHDHQ8NE62 594 aaPredicted RBP10.48□□□□□ -0.73
PSPC1-207ENST00000635251 DBF4BQ8NFT6 615 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 PIH1D2Q8WWB5 315 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 RHBDF1Q96CC6 855 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 AMBRA1Q9C0C7 1298 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 ELAC1Q9H777 363 aaKnown RBP10.48□□□□□ -0.73
PSPC1-207ENST00000635251 C1orf109Q9NX04 203 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 PSME2Q9UL46 239 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 AP3M1Q9Y2T2 418 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 U3KQV3 271 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 CHD5Q8TDI0 1954 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 ANKRD12Q6UB98 2062 aa10.48□□□□□ -0.73
PSPC1-207ENST00000635251 GLYATL1P3A0A0U1RQE8 302 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 LOC100130705A0A1B0GUX0 176 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 TRIM64BA6NI03 449 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 PTGES3LE9PB15 166 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 CA12O43570 354 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 CBFA2T3O75081 653 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 SLC10A3P09131 477 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 AGXTP21549 392 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 BMXP51813 675 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 PLA2G16P53816 162 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 CD47Q08722 323 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 CPSF6Q16630 551 aaKnown RBP eCLIP10.47□□□□□ -0.73
PSPC1-207ENST00000635251 GRAMD4Q6IC98 578 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 GALNT18Q6P9A2 607 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 ZNF783Q6ZMS7 281 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 MBOAT1Q6ZNC8 495 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 TMEM132CQ8N3T6 1108 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 BCL7CQ8WUZ0 217 aaPredicted RBP10.47□□□□□ -0.73
PSPC1-207ENST00000635251 TANKQ92844 425 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 COX4I2Q96KJ9 171 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 NTMT1Q9BV86 223 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 RAD21L1Q9H4I0 556 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 PARVBQ9HBI1 364 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 DCAF13Q9NV06 445 aaKnown RBP10.47□□□□□ -0.73
PSPC1-207ENST00000635251 USE1Q9NZ43 259 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 AFF4Q9UHB7 1163 aaKnown RBP10.47□□□□□ -0.73
PSPC1-207ENST00000635251 BAG5Q9UL15 447 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 PCDHB14Q9Y5E9 798 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 TMEM88BA6NKF7 163 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 FAM220BPB1ANY3 271 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 J3QRK9 145 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 ARVCFO00192 962 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 GAPDHSO14556 408 aaPredicted RBP10.47□□□□□ -0.73
PSPC1-207ENST00000635251 STK16O75716 305 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 KRT6AP02538 564 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 KRT6BP04259 564 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 GSNP06396 782 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 ANXA5P08758 320 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 OCM2P0CE71 109 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 OCMP0CE72 109 aaPredicted RBP10.47□□□□□ -0.73
PSPC1-207ENST00000635251 NR4A1P22736 598 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 GKP32189 559 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 S100A3P33764 101 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 KRT6CP48668 564 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 RAD23AP54725 363 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 GABARAPL2P60520 117 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 AP1S1P61966 158 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 RPS14P62263 151 aaKnown RBP10.47□□□□□ -0.73
PSPC1-207ENST00000635251 SMAD3P84022 425 aaKnown RBP10.47□□□□□ -0.73
PSPC1-207ENST00000635251 IL1RL1Q01638 556 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 NR1D2Q14995 579 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 CTU2Q2VPK5 515 aaKnown RBP10.47□□□□□ -0.73
PSPC1-207ENST00000635251 PGS1Q32NB8 556 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 TTLL9Q3SXZ7 439 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 USP39Q53GS9 565 aaKnown RBP10.47□□□□□ -0.73
PSPC1-207ENST00000635251 LYPLAL1Q5VWZ2 237 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 ATG9BQ674R7 924 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 KIAA1841Q6NSI8 718 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 DET1Q7L5Y6 550 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 TRIM46Q7Z4K8 759 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 GPR149Q86SP6 731 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 ZCCHC7Q8N3Z6 543 aaKnown RBP10.47□□□□□ -0.73
PSPC1-207ENST00000635251 NAT16Q8N8M0 369 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 PJA1Q8NG27 643 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 NETO1Q8TDF5 533 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 FRS2Q8WU20 508 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 FBXL8Q96CD0 374 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 CEP295NLQ96MC4 621 aa10.47□□□□□ -0.73
PSPC1-207ENST00000635251 KLF16Q9BXK1 252 aaPredicted RBP10.47□□□□□ -0.73
PSPC1-207ENST00000635251 KAT8Q9H7Z6 458 aaKnown RBP10.47□□□□□ -0.73
PSPC1-207ENST00000635251 RMND5AQ9H871 391 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms