RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CCM2Q9BSQ5 444 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 MAP1BP46821 2468 aaKnown RBP12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 LOC100653049A0A140TA62 436 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 ISM1B1AKI9 464 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 KRT34O76011 436 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 ACRV1P26436 265 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 VHLP40337 213 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 ANGPT1Q15389 498 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 LRRC8EQ6NSJ5 796 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 ZYG11AQ6WRX3 759 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 FRMD7Q6ZUT3 714 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 SLC38A3Q99624 504 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 SHCBP1LQ9BZQ2 653 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 ACSS2Q9NR19 701 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 WSB2Q9NYS7 404 aaPredicted RBP12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 MATN2O00339 956 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 WISP3O95389 354 aaPredicted RBP12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 JUNP05412 331 aaKnown RBP12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 SYPP08247 313 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 ALDH4A1P30038 563 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 ZNF140P52738 457 aaPredicted RBP12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 HNRNPKP61978 463 aaKnown RBP eCLIP12.2□□□□□ -0.469e-6■■■□□ 18.9
SYNGAP1-207ENST00000628646 CDK3Q00526 305 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 SGO1Q5FBB7 561 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 FBXO39Q8N4B4 442 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 TBC1D19Q8N5T2 526 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 JADE3Q92613 823 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 TADA1Q96BN2 335 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 TRIM15Q9C019 465 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 LAMA2P24043 3122 aaKnown RBP12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 ITGAXP20702 1163 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 CD27P26842 260 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 CCNIQ14094 377 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 AMZ1Q400G9 498 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 TMEM52BQ4KMG9 183 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 KIAA0907Q7Z7F0 614 aaPredicted RBP12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 CBARPQ8N350 705 aaPredicted RBP12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 STAG3L4Q8TBR4 150 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 STON2Q8WXE9 905 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 DNAJC9Q8WXX5 260 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 CNDP1Q96KN2 507 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 HCN4Q9Y3Q4 1203 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 DYRK1BQ9Y463 629 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 A0A1B0GVT2 93 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 POM121BA6NF01 834 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 KHNYNO15037 678 aaKnown RBP12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 SLC2A4P14672 509 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 HMOX2P30519 316 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 DRD3P35462 400 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 NUDT1P36639 197 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 ELOCQ15369 112 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 AASDHQ4L235 1098 aaPredicted RBP12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 PAQR3Q6TCH7 311 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 PIM3Q86V86 326 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 GKN2Q86XP6 184 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 DTX3LQ8TDB6 740 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 ACTRT2Q8TDY3 377 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 TRIB3Q96RU7 358 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 EPHX3Q9H6B9 360 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 CD93Q9NPY3 652 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 MBNL1Q9NR56 388 aaKnown RBP12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 XPR1Q9UBH6 696 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 ANXA5P08758 320 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 ITPKAP23677 461 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 ADSLP30566 484 aaPredicted RBP12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 AFF3P51826 1226 aaKnown RBP12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 ATP6V0D1P61421 351 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 CYLC2Q14093 348 aaPredicted RBP12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 PDCD2Q16342 344 aaPredicted RBP12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 IMPG1Q17R60 797 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 DDIASQ8IXT1 998 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 ZBTB18Q99592 522 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 RIC8BQ9NVN3 520 aa12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.19□□□□□ -0.46
SYNGAP1-207ENST00000628646 CXorf51AA0A1B0GTR3 108 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 AIM2O14862 343 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 PLRG1O43660 514 aaKnown RBP12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 VEGFDO43915 354 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 SUZ12Q15022 739 aaKnown RBP12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 PFKFB4Q16877 469 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 ADAMTSL2Q86TH1 951 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 PLA2G15Q8NCC3 412 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 OR13J1Q8NGT2 312 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 COLEC10Q9Y6Z7 277 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 A0A1B0GTW7 788 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 NPEPPSL1A6NEC2 478 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 K7ESM1 405 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 AREL1O15033 823 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 NVLO15381 856 aaKnown RBP12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 LINGO3P0C6S8 592 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 ANPEPP15144 967 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 PLOD1Q02809 727 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 ANKS6Q68DC2 871 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 ALG1LQ6GMV1 187 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 OR13H1Q8NG92 308 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 LCN9Q8WX39 176 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 CACNA1EQ15878 2313 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 E9PBE3 544 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 KLHL41O60662 606 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 ZNF821O75541 412 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms