RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 REPS1Q96D71 796 aa9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 CXorf40BQ96DE9 158 aa9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 C12orf66Q96MD2 445 aa9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 ELAC2Q9BQ52 826 aaKnown RBP9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 HAUS8Q9BT25 410 aa9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 HGH1Q9BTY7 390 aa9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 NUSAP1Q9BXS6 441 aaKnown RBP9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 UNKQ9C0B0 810 aaKnown RBP9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 MIR1-1HGQ9H1L0 117 aa9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 C12orf65Q9H3J6 166 aaKnown RBP9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 DNAJC11Q9NVH1 559 aa9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 GPRC5BQ9NZH0 403 aa9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 DLGAP2Q9P1A6 1054 aa9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 GALPQ9UBC7 116 aa9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 SPASTQ9UBP0 616 aa9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 EIF2B4Q9UI10 523 aaKnown RBP9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 HAO1Q9UJM8 370 aa9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 CDYLQ9Y232 598 aa9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 PDE10AQ9Y233 779 aa9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 DNAJC16Q9Y2G8 782 aa9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 DYRK1BQ9Y463 629 aa9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 KCNE2Q9Y6J6 123 aa9.9□□□□□ -0.82
FOXCUT-201ENST00000628509 A0A1B0GTW7 788 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 NEMP2A6NFY4 417 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 TMEM202A6NGA9 273 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 C10orf142B7Z368 130 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 TLR4O00206 839 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 VILLO15195 856 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 HDAC3O15379 428 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 BCAT2O15382 392 aaPredicted RBP9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 SNX3O60493 162 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 CCNT2O60583 730 aaKnown RBP9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 C1orf105O95561 183 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 FGF4P08620 206 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 RPS17P08708 135 aaKnown RBP9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 EBLN1P0CF75 366 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 MTHFD2P13995 350 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 EZRP15311 586 aaKnown RBP9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 DRD4P21917 467 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 CXCR2P25025 360 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 CA5AP35218 305 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 ACTR1BP42025 376 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 PREPP48147 710 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 ARRB1P49407 418 aaPredicted RBP9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 ACTR1AP61163 376 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 LSM11P83369 360 aaKnown RBP eCLIP9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 LAPTM5Q13571 262 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 GTF2H2Q13888 395 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 HIST2H2ACQ16777 129 aaPredicted RBP9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 PAGE2BQ5JRK9 111 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 METTL21CQ5VZV1 264 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 HIST2H2AA3Q6FI13 130 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 GTF2H2CQ6P1K8 395 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 KLHL35Q6PF15 583 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 ZC3H14Q6PJT7 736 aaKnown RBP9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 IL27RAQ6UWB1 636 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 ABRAXAS1Q6UWZ7 409 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 ZCCHC23Q6ZST2 131 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 GPRIN3Q6ZVF9 776 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 RD3Q7Z3Z2 195 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 C11orf96Q7Z7L8 435 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 SLC9B2Q86UD5 537 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 PARP9Q8IXQ6 854 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 SYTL1Q8IYJ3 562 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 PELI3Q8N2H9 469 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 DTWD2Q8NBA8 298 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 OR13H1Q8NG92 308 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 OR6Y1Q8NGX8 325 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 UBE2E3Q969T4 207 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 SH3KBP1Q96B97 665 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 RILPQ96NA2 401 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 TMEM237Q96Q45 408 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 FERD3LQ96RJ6 166 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 ZNF382Q96SR6 550 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 TUBB6Q9BUF5 446 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 OR52A5Q9H2C5 316 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 ERVMER34-1Q9H9K5 563 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 FGF22Q9HCT0 170 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 MID1IP1Q9NPA3 183 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 EVA1BQ9NVM1 165 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 RIC8BQ9NVN3 520 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 DNAJC28Q9NX36 388 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 APOBEC3BQ9UH17 382 aaKnown RBP9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 TSR3Q9UJK0 312 aaKnown RBP9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 PCOLCE2Q9UKZ9 415 aa9.89□□□□□ -0.83
FOXCUT-201ENST00000628509 FAM221BA6H8Z2 402 aa9.88□□□□□ -0.83
FOXCUT-201ENST00000628509 MYO1CO00159 1063 aa9.88□□□□□ -0.83
FOXCUT-201ENST00000628509 KIAA0754O94854 1291 aa9.88□□□□□ -0.83
FOXCUT-201ENST00000628509 WDR47O94967 919 aa9.88□□□□□ -0.83
FOXCUT-201ENST00000628509 FKBP9O95302 570 aa9.88□□□□□ -0.83
FOXCUT-201ENST00000628509 ESRRBO95718 433 aa9.88□□□□□ -0.83
FOXCUT-201ENST00000628509 KRT6AP02538 564 aa9.88□□□□□ -0.83
FOXCUT-201ENST00000628509 KRT6BP04259 564 aa9.88□□□□□ -0.83
FOXCUT-201ENST00000628509 SBK3P0C264 359 aa9.88□□□□□ -0.83
FOXCUT-201ENST00000628509 UROSP10746 265 aa9.88□□□□□ -0.83
FOXCUT-201ENST00000628509 F3P13726 295 aa9.88□□□□□ -0.83
FOXCUT-201ENST00000628509 JUNDP17535 347 aa9.88□□□□□ -0.83
FOXCUT-201ENST00000628509 GNAZP19086 355 aa9.88□□□□□ -0.83
FOXCUT-201ENST00000628509 HRH2P25021 359 aa9.88□□□□□ -0.83
FOXCUT-201ENST00000628509 ACADLP28330 430 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms