RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 SHHQ15465 462 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 IMPG1Q17R60 797 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 POM121L1PQ3SYA9 428 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 GGTA1PQ4G0N0 100 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 LDLRAP1Q5SW96 308 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 ERAP2Q6P179 960 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 LIPIQ6XZB0 460 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 GALNT13Q8IUC8 556 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 SPPL2CQ8IUH8 684 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 HID1Q8IV36 788 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 RASGRP3Q8IV61 690 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 ETFBKMTQ8IXQ9 262 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 RGL4Q8IZJ4 473 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 MCOLN3Q8TDD5 553 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 EME1Q96AY2 570 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 P2RY13Q9BPV8 354 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 INTS7Q9NVH2 962 aaKnown RBP19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 SNX13Q9Y5W8 968 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 LAMA3Q16787 3333 aa19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 ARPC2O15144 300 aa19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 SLCO2B1O94956 709 aa19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 ELFN1P0C7U0 828 aa19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 ZCCHC18P0CG32 403 aa19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 ZNF26P17031 533 aaPredicted RBP19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 HSPA13P48723 471 aa19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 INPP5AQ14642 412 aa19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 PDK3Q15120 406 aa19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 PTCHD3Q3KNS1 767 aa19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 SGO1Q5FBB7 561 aa19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 DLEU7Q6UYE1 221 aa19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 PARS2Q7L3T8 475 aaKnown RBP19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 MARVELD2Q8N4S9 558 aa19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 SAMD11Q96NU1 681 aa19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 KCTD14Q9BQ13 255 aaPredicted RBP19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 LRTM1Q9HBL6 345 aa19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 PDP2Q9P2J9 529 aa19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 ZNHIT2Q9UHR6 403 aa19.25■□□□□ 0.67
PCDHB11-202ENST00000624887 LINGO3P0C6S8 592 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 CPSF6Q16630 551 aaKnown RBP eCLIP19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 ADGRD2Q7Z7M1 963 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 NRSN1Q8IZ57 195 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 BEND7Q8N7W2 519 aaPredicted RBP19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 C12orf76Q8N812 135 aaPredicted RBP19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 GLYATL1Q969I3 302 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 ZBTB18Q99592 522 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 SEMA6AQ9H2E6 1030 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 CHD9Q3L8U1 2897 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 DHRS12A0PJE2 317 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 OR2AG2A6NM03 316 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 H0YJX3 145 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 PSMD11O00231 422 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 MAGEA10P43363 369 aaPredicted RBP19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 DGKQP52824 942 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 PTGR1Q14914 329 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 GRIN2CQ14957 1233 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 AAK1Q2M2I8 961 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 ZNF648Q5T619 568 aaPredicted RBP19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 CACHD1Q5VU97 1274 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 HMBOX1Q6NT76 420 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 NEK5Q6P3R8 708 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 RAVER1Q8IY67 606 aaKnown RBP19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 L3MBTL4Q8NA19 623 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 GLB1L3Q8NCI6 653 aaPredicted RBP19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 PIP4K2CQ8TBX8 421 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 NXPE3Q969Y0 559 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 TMEM74Q96NL1 305 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 C1orf109Q9NX04 203 aa19.24■□□□□ 0.67
PCDHB11-202ENST00000624887 KCNE1BA0A087WTH5 132 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 KPNA3O00505 521 aaPredicted RBP19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 SEC22BO75396 215 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 PRNPP04156 253 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 HTR1EP28566 365 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 MESP2Q0VG99 397 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 GRM2Q14416 872 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 FXNQ16595 210 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 TMC5Q6UXY8 1006 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 ERMP1Q7Z2K6 904 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 IFNEQ86WN2 208 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 LIX1Q8N485 282 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 GALNT4Q8N4A0 578 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 BPIFB1Q8TDL5 484 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 AP2M1Q96CW1 435 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 ACPTQ9BZG2 426 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 SNX6Q9UNH7 406 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 AP4B1Q9Y6B7 739 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 PRRT4C9JH25 899 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 WNT9AO14904 365 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 HNRNPRO43390 633 aaKnown RBP19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 TIPRLO75663 272 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 NFATC1O95644 943 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 PDYNP01213 254 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 GSTM1P09488 218 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 BMP2P12643 396 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 PSMA4P25789 261 aaKnown RBP19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 ERVK-21P61565 698 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 GSTM4Q03013 218 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 GPM6BQ13491 265 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 PWP1Q13610 501 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 ACOX1Q15067 660 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 MTX3Q5HYI7 312 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms