RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, human

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDHGC3-208	ENST00000622836	CNST	Q6PJW8	725 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	UNC5D	Q6UXZ4	953 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	UNC5A	Q6ZN44	842 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	KMT5C	Q86Y97	462 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	ANKMY2	Q8IV38	441 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	RASGRP3	Q8IV61	690 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	IGDCC3	Q8IVU1	814 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	DCUN1D3	Q8IWE4	304 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	ZBTB2	Q8N680	514 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	FBXO36	Q8NEA4	188 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	KLHL6	Q8WZ60	621 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	CERS2	Q96G23	380 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	NRTN	Q99748	197 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	APMAP	Q9HDC9	416 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	PDE7B	Q9NP56	450 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	SIDT1	Q9NXL6	827 aa	Known RBP	13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	WHRN	Q9P202	907 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	CIDEB	Q9UHD4	219 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	ACSL6	Q9UKU0	697 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	POMT2	Q9UKY4	750 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	SLC39A10	Q9ULF5	831 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	LHX6	Q9UPM6	363 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	ICK	Q9UPZ9	632 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	MRFAP1	Q9Y605	127 aa		13.56	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	KIF2A	O00139	706 aa	Predicted RBP	13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	ZBTB11	O95625	1053 aa	Predicted RBP	13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	TUBB4A	P04350	444 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	ATP1A2	P50993	1020 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	TMPRSS3	P57727	454 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	CXADR	P78310	365 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	HSD11B2	P80365	405 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	TUBB3	Q13509	450 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	KCNAB1	Q14722	419 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	TGIF1	Q15583	401 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	WHAMMP3	Q1A5X7	153 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	C8orf74	Q6P047	294 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	FBXO38	Q6PIJ6	1188 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	ZBED8	Q8IZ13	594 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	CARF	Q8N187	725 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	RAB42	Q8N4Z0	105 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	C1GALT1	Q9NS00	363 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	ACTR10	Q9NZ32	417 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	OR6C2	Q9NZP2	312 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	RARRES3	Q9UL19	164 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	RUVBL2	Q9Y230	463 aa	Known RBP	13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	COMMD10	Q9Y6G5	202 aa		13.55	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	SLC9B1P1	A6NJY1	282 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	ISM1	B1AKI9	464 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	VPS26A	O75436	327 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	HAUS5	O94927	633 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	CHRM5	P08912	532 aa	Predicted RBP	13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	EBLN1	P0CF75	366 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	PRDX3	P30048	256 aa	Known RBP	13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	ATP5D	P30049	168 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	BDKRB1	P46663	353 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	RAB28	P51157	221 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	ACY1	Q03154	408 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	CUL1	Q13616	776 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	IL11RA	Q14626	422 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	MANEA	Q5SRI9	462 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	PPP1R3B	Q86XI6	285 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	ADGRF3	Q8IZF5	1079 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	IL22RA1	Q8N6P7	574 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	MAGEC3	Q8TD91	643 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	KCNJ9	Q92806	393 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	RAD51AP1	Q96B01	352 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	RNF31	Q96EP0	1072 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	CRELD1	Q96HD1	420 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	SLC41A2	Q96JW4	573 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	PPM1M	Q96MI6	270 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	CCNL2	Q96S94	520 aa	Predicted RBP	13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	ULBP3	Q9BZM4	244 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	KLHL25	Q9H0H3	589 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	LATS2	Q9NRM7	1088 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	ZFAT	Q9P243	1243 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	GALP	Q9UBC7	116 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	NFS1	Q9Y697	457 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	TEX264	Q9Y6I9	313 aa		13.54	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	STK17B	O94768	372 aa		13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	FOLR1	P15328	257 aa		13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	PKLR	P30613	574 aa		13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	CCNF	P41002	786 aa		13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	CLCN7	P51798	805 aa		13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	PLTP	P55058	493 aa		13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	FASTKD3	Q14CZ7	662 aa	Known RBP	13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	KLHL38	Q2WGJ6	581 aa		13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	ACSBG2	Q5FVE4	666 aa		13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	DUPD1	Q68J44	220 aa		13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	UGT3A1	Q6NUS8	523 aa		13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	ZNF549	Q6P9A3	640 aa		13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	TRMT10B	Q6PF06	316 aa	Known RBP	13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	SPESP1	Q6UW49	350 aa		13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	CCDC81	Q6ZN84	652 aa		13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	CAPN12	Q6ZSI9	719 aa		13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	KIAA0408	Q6ZU52	694 aa		13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	TAX1BP1	Q86VP1	789 aa		13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	PALM2	Q8IXS6	379 aa		13.53	□□□□□ -0.24
PCDHGC3-208	ENST00000622836	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.53	□□□□□ -0.24

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