RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CDKL1Q00532 357 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 ELOCQ15369 112 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 CCSMST1Q4G0I0 132 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 FBXO48Q5FWF7 155 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 SULT1C3Q6IMI6 304 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 DUS1LQ6P1R4 473 aaKnown RBP17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 TTC23LQ6PF05 361 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 ABRAXAS1Q6UWZ7 409 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 CCNYL1Q8N7R7 359 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 PDPRQ8NCN5 879 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 MAGEC3Q8TD91 643 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 LMX1AQ8TE12 382 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 ZNF317Q96PQ6 595 aaPredicted RBP17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 TMEM237Q96Q45 408 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 TRIT1Q9H3H1 467 aaKnown RBP17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 RABEP2Q9H5N1 569 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 ACSS2Q9NR19 701 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 SCHIP1Q9P0W5 487 aaPredicted RBP17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 CIDEBQ9UHD4 219 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 PCOLCE2Q9UKZ9 415 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 STX16-NPEPL1H3BU86 382 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 STX16O14662 325 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 H2AFYO75367 372 aaKnown RBP17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 SERPINE1P05121 402 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 F3P13726 295 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 DRD4P21917 467 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 AGTR2P50052 363 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 NAGLUP54802 743 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 BNC1Q01954 994 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 SETDB1Q15047 1291 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 RPE65Q16518 533 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 DUOXA1Q1HG43 343 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 CDKL4Q5MAI5 379 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 ATG16L1Q676U5 607 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 RABEPKQ7Z6M1 372 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 DCUN1D3Q8IWE4 304 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 FBXO15Q8NCQ5 510 aaPredicted RBP17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 OR5K2Q8NHB8 316 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 RAB3IL1Q8TBN0 382 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 RHBDF1Q96CC6 855 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 FERD3LQ96RJ6 166 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 PKP4Q99569 1192 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 GATA5Q9BWX5 397 aaPredicted RBP17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 ERVMER34-1Q9H9K5 563 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 WWOXQ9NZC7 414 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 TDRKHQ9Y2W6 561 aaKnown RBP17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 ADAMTS9Q9P2N4 1935 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 A6NCN8 305 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 TCP11X1B4DZS4 312 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 EBAG9O00559 213 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 SIX3O95343 332 aaPredicted RBP17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 MTHFD1P11586 935 aaKnown RBP17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 IMPDH1P20839 514 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 EEF1DP29692 281 aaKnown RBP17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 HERVK_113P63132 956 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 PRKG2Q13237 762 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 STX3Q13277 289 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 KRT33BQ14525 404 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 C18orf21Q32NC0 220 aaPredicted RBP17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 CFAP157Q5JU67 520 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 ZC3H14Q6PJT7 736 aaKnown RBP17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 TBC1D21Q8IYX1 336 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 ZNF548Q8NEK5 533 aaPredicted RBP17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 CEP76Q8TAP6 659 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 L3HYPDHQ96EM0 354 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 MOCOSQ96EN8 888 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 CCDC138Q96M89 665 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 HGH1Q9BTY7 390 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 ERVK-6Q9BXR3 956 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 PTBP2Q9UKA9 531 aaKnown RBP17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 DOLKQ9UPQ8 538 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 HEBP2Q9Y5Z4 205 aa17.34■□□□□ 0.37
PTCHD3-202ENST00000622555 LRRC14BA6NHZ5 514 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 MYO1CO00159 1063 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 KLF11O14901 512 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 SDC3O75056 442 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 GRK2P25098 689 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 BST1Q10588 318 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 ZNF678Q5SXM1 525 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 CES4AQ5XG92 561 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 RGS9BPQ6ZS82 235 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 GKN2Q86XP6 184 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 TCAIMQ8N3R3 496 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 FAM46DQ8NEK8 389 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 OR9A1PQ8NGU1 263 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 ESAMQ96AP7 390 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 RAD51AP1Q96B01 352 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 FBXL8Q96CD0 374 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 MVB12BQ9H7P6 319 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 RAB23Q9ULC3 237 aa17.33■□□□□ 0.37
PTCHD3-202ENST00000622555 TRBV23OR9-2A0A075B6M9 112 aa17.33■□□□□ 0.36
PTCHD3-202ENST00000622555 TAPBPO15533 448 aa17.33■□□□□ 0.36
PTCHD3-202ENST00000622555 AQP9O43315 295 aa17.33■□□□□ 0.36
PTCHD3-202ENST00000622555 PIAS2O75928 621 aa17.33■□□□□ 0.36
PTCHD3-202ENST00000622555 HSPA7P48741 367 aa17.33■□□□□ 0.36
PTCHD3-202ENST00000622555 HNMTP50135 292 aa17.33■□□□□ 0.36
PTCHD3-202ENST00000622555 OR6Y1Q8NGX8 325 aa17.33■□□□□ 0.36
PTCHD3-202ENST00000622555 PPP4R1Q8TF05 950 aa17.33■□□□□ 0.36
PTCHD3-202ENST00000622555 UBTD2Q8WUN7 234 aa17.33■□□□□ 0.36
PTCHD3-202ENST00000622555 ATL1Q8WXF7 558 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms