RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ATG9BQ674R7 924 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 CAPN13Q6MZZ7 669 aaPredicted RBP19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 OR7D4Q8NG98 312 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 OR10Q1Q8NGQ4 319 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 GPR152Q8TDT2 470 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 C8orf48Q96LL4 319 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 RHNO1Q9BSD3 238 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 SLIRPQ9GZT3 109 aaKnown RBP19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 GABARAPL1Q9H0R8 117 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 RMND5AQ9H871 391 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 BPIFA1Q9NP55 256 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 PCDHB8Q9UN66 801 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 TSC22D4Q9Y3Q8 395 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 PKP3Q9Y446 797 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 SLC12A8A0AV02 714 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 ARVCFO00192 962 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 PSMB9P28065 219 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 CD40LGP29965 261 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 PIK3CGP48736 1102 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 HUNKP57058 714 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 DGCR6Q14129 220 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 SIM2Q14190 667 aaPredicted RBP19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 MAPK11Q15759 364 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 CCDC81Q6ZN84 652 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 LRRC8DQ7L1W4 858 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 PRSS48Q7RTY5 328 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 CFAP52Q8N1V2 620 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 GLB1L3Q8NCI6 653 aaPredicted RBP19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 LPCAT1Q8NF37 534 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 CPPED1Q9BRF8 314 aaPredicted RBP19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 RIBC2Q9H4K1 309 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 SPC25Q9HBM1 224 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 KLQ9UEF7 1012 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 AP3M1Q9Y2T2 418 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 PFDN6O15212 129 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 INSIG1O15503 277 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 RGS14O43566 566 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 OXSR1O95747 527 aaPredicted RBP19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 CYP4B1P13584 511 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 PAX3P23760 479 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 GGT5P36269 586 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 HMGCS1Q01581 520 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 FPGSQ05932 587 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 SELENBP1Q13228 472 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 PHKG1Q16816 387 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 CARD16Q5EG05 197 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 CES5AQ6NT32 575 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 SUSD1Q6UWL2 747 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 NEK10Q6ZWH5 1172 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 PDLIM5Q96HC4 596 aaKnown RBP19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 PYURFQ96I23 114 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 UROC1Q96N76 676 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 PSKH2Q96QS6 385 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 CINPQ9BW66 212 aaPredicted RBP19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 ASPSCR1Q9BZE9 553 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 ZFP14Q9HCL3 533 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 FARSBQ9NSD9 589 aaKnown RBP19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 C1orf109Q9NX04 203 aa19.17■□□□□ 0.66
PDLIM3-212ENST00000620787 FFAR3O14843 346 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 AREL1O15033 823 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 GPR42O15529 346 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 GPR39O43194 453 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 RECQL5O94762 991 aaPredicted RBP19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 MYO1DO94832 1006 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 ESR1P03372 595 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 TACR2P21452 398 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 MAGEA2P43356 314 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 HSPA7P48741 367 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 CXCR4P61073 352 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 IRF5Q13568 498 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 LAPTM4AQ15012 233 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 FAM110CQ1W6H9 321 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 SMU1Q2TAY7 513 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 C10orf120Q5SQS8 335 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 ADAMTSL2Q86TH1 951 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 CHCHD4Q8N4Q1 142 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 TRIB2Q92519 343 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 EFHD2Q96C19 240 aaPredicted RBP19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 OR52E6Q96RD3 313 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 DSN1Q9H410 356 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 NSUN3Q9H649 340 aaKnown RBP19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 ELOVL2Q9NXB9 296 aa19.16■□□□□ 0.66
PDLIM3-212ENST00000620787 TAPBPO15533 448 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 FFAR2O15552 330 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 SEC24AO95486 1093 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 FADS2O95864 444 aaKnown RBP19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 NTRK1P04629 796 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 CR2P20023 1033 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 ST13P50502 369 aaKnown RBP19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 DAPP51397 102 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 MAD2L1Q13257 205 aaPredicted RBP19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 KEAP1Q14145 624 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 PTPRRQ15256 657 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 CEP68Q76N32 757 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 LGI2Q8N0V4 545 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 CARNMT1Q8N4J0 409 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 RHOXF1Q8NHV9 184 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 RPL3LQ92901 407 aaKnown RBP19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 FAM120BQ96EK7 910 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms