RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 NRTNQ99748 197 aa21.34■■□□□ 1.01
SRRT-218ENST00000620394 HGH1Q9BTY7 390 aa21.34■■□□□ 1.01
SRRT-218ENST00000620394 TSGA10Q9BZW7 698 aa21.34■■□□□ 1.01
SRRT-218ENST00000620394 ETNK1Q9HBU6 452 aa21.34■■□□□ 1.01
SRRT-218ENST00000620394 ICKQ9UPZ9 632 aa21.34■■□□□ 1.01
SRRT-218ENST00000620394 MED13Q9UHV7 2174 aa21.34■■□□□ 1.01
SRRT-218ENST00000620394 HEATR9A2RTY3 570 aa21.33■■□□□ 1.01
SRRT-218ENST00000620394 CCDC162PA2VCL2 907 aa21.33■■□□□ 1.01
SRRT-218ENST00000620394 OR51F1A6NGY5 319 aa21.33■■□□□ 1.01
SRRT-218ENST00000620394 C2orf74A8MZ97 194 aa21.33■■□□□ 1.01
SRRT-218ENST00000620394 CEACAM4O75871 244 aa21.33■■□□□ 1.01
SRRT-218ENST00000620394 FTH1P02794 183 aa21.33■■□□□ 1.01
SRRT-218ENST00000620394 DCTP40126 519 aa21.33■■□□□ 1.01
SRRT-218ENST00000620394 MRPL49Q13405 166 aaKnown RBP21.33■■□□□ 1.01
SRRT-218ENST00000620394 CCDC38Q502W7 563 aa21.33■■□□□ 1.01
SRRT-218ENST00000620394 PRR30Q53SZ7 412 aaPredicted RBP21.33■■□□□ 1.01
SRRT-218ENST00000620394 PLEKHS1Q5SXH7 462 aa21.33■■□□□ 1.01
SRRT-218ENST00000620394 JMJD6Q6NYC1 403 aaPredicted RBP21.33■■□□□ 1.01
SRRT-218ENST00000620394 AFTPHQ6ULP2 937 aa21.33■■□□□ 1.01
SRRT-218ENST00000620394 SLC13A5Q86YT5 568 aaPredicted RBP21.33■■□□□ 1.01
SRRT-218ENST00000620394 DSELQ8IZU8 1212 aa21.33■■□□□ 1.01
SRRT-218ENST00000620394 PHC3Q8NDX5 983 aa21.33■■□□□ 1.01
SRRT-218ENST00000620394 OR1L3Q8NH93 324 aa21.33■■□□□ 1.01
SRRT-218ENST00000620394 CPT1BQ92523 772 aa21.33■■□□□ 1.01
SRRT-218ENST00000620394 TRAPPC9Q96Q05 1148 aa21.33■■□□□ 1.01
SRRT-218ENST00000620394 ALS2CR12Q96Q35 445 aa21.33■■□□□ 1.01
SRRT-218ENST00000620394 SLAMF7Q9NQ25 335 aa21.33■■□□□ 1.01
SRRT-218ENST00000620394 ITPR2Q14571 2701 aa21.33■■□□□ 1
SRRT-218ENST00000620394 SLC5A10A0PJK1 596 aa21.32■■□□□ 1
SRRT-218ENST00000620394 CCDC78A2IDD5 438 aa21.32■■□□□ 1
SRRT-218ENST00000620394 RAB40ALP0C0E4 278 aa21.32■■□□□ 1
SRRT-218ENST00000620394 PTGIRP43119 386 aa21.32■■□□□ 1
SRRT-218ENST00000620394 PLOD1Q02809 727 aaPredicted RBP21.32■■□□□ 1
SRRT-218ENST00000620394 EIF2S3LQ2VIR3 472 aaKnown RBP21.32■■□□□ 1
SRRT-218ENST00000620394 PRAMEF17Q5VTA0 474 aa21.32■■□□□ 1
SRRT-218ENST00000620394 DNAAF3Q8N9W5 541 aa21.32■■□□□ 1
SRRT-218ENST00000620394 SPC24Q8NBT2 197 aa21.32■■□□□ 1
SRRT-218ENST00000620394 PEX13Q92968 403 aa21.32■■□□□ 1
SRRT-218ENST00000620394 MR1Q95460 341 aa21.32■■□□□ 1
SRRT-218ENST00000620394 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.32■■□□□ 1
SRRT-218ENST00000620394 SGSM3Q96HU1 749 aa21.32■■□□□ 1
SRRT-218ENST00000620394 CHST8Q9H2A9 424 aa21.32■■□□□ 1
SRRT-218ENST00000620394 ACTR10Q9NZ32 417 aa21.32■■□□□ 1
SRRT-218ENST00000620394 FARSAQ9Y285 508 aaKnown RBP21.32■■□□□ 1
SRRT-218ENST00000620394 TMEM150CB9EJG8 249 aa21.31■■□□□ 1
SRRT-218ENST00000620394 MEN1O00255 615 aa21.31■■□□□ 1
SRRT-218ENST00000620394 KLK3P07288 261 aaPredicted RBP21.31■■□□□ 1
SRRT-218ENST00000620394 SHMT2P34897 504 aa21.31■■□□□ 1
SRRT-218ENST00000620394 GRIA1P42261 906 aa21.31■■□□□ 1
SRRT-218ENST00000620394 LMAN1P49257 510 aa21.31■■□□□ 1
SRRT-218ENST00000620394 PRKG2Q13237 762 aa21.31■■□□□ 1
SRRT-218ENST00000620394 TSTD2Q5T7W7 516 aa21.31■■□□□ 1
SRRT-218ENST00000620394 LYPLAL1Q5VWZ2 237 aa21.31■■□□□ 1
SRRT-218ENST00000620394 SPESP1Q6UW49 350 aa21.31■■□□□ 1
SRRT-218ENST00000620394 FAM198BQ6UWH4 519 aa21.31■■□□□ 1
SRRT-218ENST00000620394 TICAM1Q8IUC6 712 aa21.31■■□□□ 1
SRRT-218ENST00000620394 TBC1D21Q8IYX1 336 aa21.31■■□□□ 1
SRRT-218ENST00000620394 Q8NA96 180 aa21.31■■□□□ 1
SRRT-218ENST00000620394 OR5AR1Q8NGP9 310 aa21.31■■□□□ 1
SRRT-218ENST00000620394 PRR7Q8TB68 274 aa21.31■■□□□ 1
SRRT-218ENST00000620394 ADAMTS17Q8TE56 1095 aa21.31■■□□□ 1
SRRT-218ENST00000620394 ELMO1Q92556 727 aa21.31■■□□□ 1
SRRT-218ENST00000620394 PNPLA2Q96AD5 504 aa21.31■■□□□ 1
SRRT-218ENST00000620394 CHRNA10Q9GZZ6 450 aa21.31■■□□□ 1
SRRT-218ENST00000620394 XKR8Q9H6D3 395 aa21.31■■□□□ 1
SRRT-218ENST00000620394 PCMTD2Q9NV79 361 aa21.31■■□□□ 1
SRRT-218ENST00000620394 BHMG1C9JSJ3 638 aaPredicted RBP21.3■■□□□ 1
SRRT-218ENST00000620394 KRT86O43790 486 aa21.3■■□□□ 1
SRRT-218ENST00000620394 CLDN1O95832 211 aa21.3■■□□□ 1
SRRT-218ENST00000620394 GAS8O95995 478 aa21.3■■□□□ 1
SRRT-218ENST00000620394 IFNB1P01574 187 aa21.3■■□□□ 1
SRRT-218ENST00000620394 CAPN1P07384 714 aa21.3■■□□□ 1
SRRT-218ENST00000620394 OR56A5P0C7T3 313 aa21.3■■□□□ 1
SRRT-218ENST00000620394 PVRP15151 417 aa21.3■■□□□ 1
SRRT-218ENST00000620394 SLC6A19Q695T7 634 aa21.3■■□□□ 1
SRRT-218ENST00000620394 LCN10Q6JVE6 187 aa21.3■■□□□ 1
SRRT-218ENST00000620394 PPP1R21Q6ZMI0 780 aa21.3■■□□□ 1
SRRT-218ENST00000620394 CDHR3Q6ZTQ4 885 aa21.3■■□□□ 1
SRRT-218ENST00000620394 ZNF534Q76KX8 674 aa21.3■■□□□ 1
SRRT-218ENST00000620394 OR5K2Q8NHB8 316 aa21.3■■□□□ 1
SRRT-218ENST00000620394 FLVCR1-AS1Q8TAF5 88 aa21.3■■□□□ 1
SRRT-218ENST00000620394 HDAC10Q969S8 669 aa21.3■■□□□ 1
SRRT-218ENST00000620394 NLNQ9BYT8 704 aa21.3■■□□□ 1
SRRT-218ENST00000620394 ACTR5Q9H9F9 607 aaPredicted RBP21.3■■□□□ 1
SRRT-218ENST00000620394 LUZP4Q9P127 313 aa21.3■■□□□ 1
SRRT-218ENST00000620394 MAP10Q9P2G4 905 aa21.3■■□□□ 1
SRRT-218ENST00000620394 SLC2A6Q9UGQ3 507 aa21.3■■□□□ 1
SRRT-218ENST00000620394 ASF1AQ9Y294 204 aa21.3■■□□□ 1
SRRT-218ENST00000620394 TCAF1Q9Y4C2 921 aa21.3■■□□□ 1
SRRT-218ENST00000620394 WIPF3A6NGB9 483 aa21.29■■□□□ 1
SRRT-218ENST00000620394 GOT2P00505 430 aaKnown RBP21.29■■□□□ 1
SRRT-218ENST00000620394 LDLRP01130 860 aa21.29■■□□□ 1
SRRT-218ENST00000620394 TPBGLP0DKB5 382 aa21.29■■□□□ 1
SRRT-218ENST00000620394 CYP2A7P20853 494 aa21.29■■□□□ 1
SRRT-218ENST00000620394 ADRA1DP25100 572 aa21.29■■□□□ 1
SRRT-218ENST00000620394 ITGA1P56199 1179 aa21.29■■□□□ 1
SRRT-218ENST00000620394 SIX1Q15475 284 aaPredicted RBP21.29■■□□□ 1
SRRT-218ENST00000620394 ZNF385CQ66K41 422 aaPredicted RBP21.29■■□□□ 1
SRRT-218ENST00000620394 NLRP9Q7RTR0 991 aa21.29■■□□□ 1
SRRT-218ENST00000620394 SYTL1Q8IYJ3 562 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms