RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 MED8Q96G25 268 aa12.13□□□□□ -0.47
CIITA-212ENST00000618207 MRGPRX3Q96LB0 322 aa12.13□□□□□ -0.47
CIITA-212ENST00000618207 TSSK3Q96PN8 268 aa12.13□□□□□ -0.47
CIITA-212ENST00000618207 IL36AQ9UHA7 158 aa12.13□□□□□ -0.47
CIITA-212ENST00000618207 TMCO1Q9UM00 188 aa12.13□□□□□ -0.47
CIITA-212ENST00000618207 PCDHA9Q9Y5H5 950 aa12.13□□□□□ -0.47
CIITA-212ENST00000618207 F5P12259 2224 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 FAM234BA2RU67 622 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 CARNS1A5YM72 827 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 C16orf96A6NNT2 1141 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 PDYNP01213 254 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 CA3P07451 260 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 ELFN1P0C7U0 828 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 SLC7A1P30825 629 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 EMX2Q04743 252 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 CCSMST1Q4G0I0 132 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 SPANXN4Q5MJ08 99 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 FOXB2Q5VYV0 432 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 NEK5Q6P3R8 708 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 SUSD1Q6UWL2 747 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 GET4Q7L5D6 327 aaPredicted RBP12.12□□□□□ -0.47
CIITA-212ENST00000618207 ZFAND4Q86XD8 727 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 ADCY4Q8NFM4 1077 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 ARMC5Q96C12 935 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 GBP5Q96PP8 586 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 TBCDQ9BTW9 1192 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 TRIM54Q9BYV2 358 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 ABCD2Q9UBJ2 740 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 SLC8A2Q9UPR5 921 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 A0A1B0GTW7 788 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 KANSL1LA0AUZ9 987 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 PRRT4C9JH25 899 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 RGS14O43566 566 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 TSPAN6O43657 245 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 DFNA5O60443 496 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 TULP3O75386 442 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 EEDO75530 441 aaKnown RBP12.12□□□□□ -0.47
CIITA-212ENST00000618207 GSNP06396 782 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 ADH5P11766 374 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 EPORP19235 508 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 VIPR1P32241 457 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 RANBP1P43487 201 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 EPHA5P54756 1037 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 GTDC1Q4AE62 458 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 PDCD4Q53EL6 469 aaKnown RBP12.12□□□□□ -0.47
CIITA-212ENST00000618207 BRAT1Q6PJG6 821 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 ZBTB49Q6ZSB9 765 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 B4GALNT2Q8NHY0 566 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 EFHD1Q9BUP0 239 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 DPY30Q9C005 99 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 CEP44Q9C0F1 390 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 SLC32A1Q9H598 525 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 ELOVL6Q9H5J4 265 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 PARVBQ9HBI1 364 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 LRTM1Q9HBL6 345 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 TMEM165Q9HC07 324 aa12.12□□□□□ -0.47
CIITA-212ENST00000618207 ENO4A6NNW6 628 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 MANBAO00462 879 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 CLDN9O95484 217 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 CYP2A6P11509 494 aaPredicted RBP12.11□□□□□ -0.47
CIITA-212ENST00000618207 PCNAP12004 261 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 GNPDA1P46926 289 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 ST8SIA6P61647 398 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 PRSS36Q5K4E3 855 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 AP2M1Q96CW1 435 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 AURKBQ96GD4 344 aaPredicted RBP12.11□□□□□ -0.47
CIITA-212ENST00000618207 EGLN2Q96KS0 407 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 THUMPD3Q9BV44 507 aaKnown RBP12.11□□□□□ -0.47
CIITA-212ENST00000618207 ACPTQ9BZG2 426 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 ZIM2Q9NZV7 527 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 VAPAQ9P0L0 249 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.11□□□□□ -0.47
CIITA-212ENST00000618207 PPIL1Q9Y3C6 166 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 ARHGAP10A1A4S6 786 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 SOCS2O14508 198 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 ZNF26P17031 533 aaPredicted RBP12.11□□□□□ -0.47
CIITA-212ENST00000618207 PSMA4P25789 261 aaKnown RBP12.11□□□□□ -0.47
CIITA-212ENST00000618207 NFKBIAP25963 317 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 PDHA2P29803 388 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 GRIA2P42262 883 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 PLOD1Q02809 727 aaPredicted RBP12.11□□□□□ -0.47
CIITA-212ENST00000618207 ZNF284Q2VY69 593 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 PRMT9Q6P2P2 845 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 PARS2Q7L3T8 475 aaKnown RBP12.11□□□□□ -0.47
CIITA-212ENST00000618207 PPP3R2Q96LZ3 170 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 PRPF18Q99633 342 aaKnown RBP12.11□□□□□ -0.47
CIITA-212ENST00000618207 EBPLQ9BY08 206 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 EIF3LQ9Y262 564 aaKnown RBP12.11□□□□□ -0.47
CIITA-212ENST00000618207 DLGAP4Q9Y2H0 992 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 CCL27Q9Y4X3 112 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 ST14Q9Y5Y6 855 aa12.11□□□□□ -0.47
CIITA-212ENST00000618207 CFAP99D6REC4 459 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 K7ESM1 405 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 PRAMEF4O60810 478 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 EFNA1P20827 205 aaPredicted RBP12.1□□□□□ -0.47
CIITA-212ENST00000618207 TACR1P25103 407 aa12.1□□□□□ -0.47
CIITA-212ENST00000618207 DDX6P26196 483 aaKnown RBP eCLIP12.1□□□□□ -0.47
CIITA-212ENST00000618207 VARSP26640 1264 aaKnown RBP12.1□□□□□ -0.47
CIITA-212ENST00000618207 RPL10P27635 214 aaKnown RBP12.1□□□□□ -0.47
CIITA-212ENST00000618207 BDKRB1P46663 353 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms