RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 ULK1O75385 1050 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 G6PDP11413 515 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 LAMP2P13473 410 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 GRIA2P42262 883 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 POLR2JP52435 117 aaKnown RBP16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 AP1S2P56377 157 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 MRPS22P82650 360 aaKnown RBP16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 CAPRIN1Q14444 709 aaKnown RBP16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 CPSF6Q16630 551 aaKnown RBP eCLIP16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 IL23RQ5VWK5 629 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 TLDC1Q6P9B6 456 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 TTC23LQ6PF05 361 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 ADGRG6Q86SQ4 1221 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 NLRP8Q86W28 1048 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 KBTBD2Q8IY47 623 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 PROKR1Q8TCW9 393 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 GLMNQ92990 594 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 ELSPBP1Q96BH3 223 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 MTFMTQ96DP5 389 aaKnown RBP16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 PCDHAC1Q9H158 963 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 ZIM2Q9NZV7 527 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 CLEC1BQ9P126 229 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 GMPR2Q9P2T1 348 aaKnown RBP16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 CIDEBQ9UHD4 219 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 MCM8Q9UJA3 840 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 SLC22A14Q9Y267 594 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 DENND4AQ7Z401 1863 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 FXYD1O00168 92 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 RGS14O43566 566 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 PSIP1O75475 530 aaKnown RBP16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 SLC2A4P14672 509 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 PDHA2P29803 388 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 RPL38P63173 70 aaKnown RBP16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 DLX2Q07687 328 aaPredicted RBP16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 CYP20A1Q6UW02 462 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 PPFIBP2Q8ND30 876 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 CXorf40AQ8TE69 158 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 PPP3R2Q96LZ3 170 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 ANKRD27Q96NW4 1050 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 GPATCH1Q9BRR8 931 aaKnown RBP16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 SLC29A3Q9BZD2 475 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 GULP1Q9UBP9 304 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 SUCOQ9UBS9 1254 aaKnown RBP16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 CD300AQ9UGN4 299 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 STON1Q9Y6Q2 735 aa16.92■□□□□ 0.3
PCDHGC3-205ENST00000617641 A0A1W2PP18 115 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 SLC28A1O00337 649 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 APODP05090 189 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 EIF2DP41214 584 aaKnown RBP16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 BDKRB1P46663 353 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 YBX1P67809 324 aaKnown RBP16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 ITPRIPL2Q3MIP1 535 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 CCSMST1Q4G0I0 132 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 TIGD2Q4W5G0 525 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 CES5AQ6NT32 575 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 TSPEARQ8WU66 669 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 FBXL8Q96CD0 374 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 ASB9Q96DX5 294 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 HDAC8Q9BY41 377 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 ACTL8Q9H568 366 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 FADS3Q9Y5Q0 445 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 CCDC154A6NI56 674 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 LILRB5O75023 590 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 MAP4P27816 1152 aaKnown RBP16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 DPTQ07507 201 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 TRIM25Q14258 630 aaKnown RBP16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 PAGE3Q5JUK9 113 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 SAMD4BQ5PRF9 694 aaKnown RBP16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 PIP5KL1Q5T9C9 394 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 EP400NLQ6ZTU2 488 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 TRIM46Q7Z4K8 759 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 TRAPPC5Q8IUR0 188 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 RGL4Q8IZJ4 473 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 NUDT8Q8WV74 236 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 USP7Q93009 1102 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 NAF1Q96HR8 494 aaKnown RBP16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 GDF15Q99988 308 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 TRMT61BQ9BVS5 477 aaKnown RBP16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 S1PR5Q9H228 398 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 MRPL40Q9NQ50 206 aaKnown RBP16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 DNAJC11Q9NVH1 559 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 BCAP29Q9UHQ4 241 aa16.91■□□□□ 0.3
PCDHGC3-205ENST00000617641 FAM234BA2RU67 622 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 NME4O00746 187 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 MID1O15344 667 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 PRAMEF4O60810 478 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 PFN3P60673 137 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 ADAM15Q13444 863 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 IMPG1Q17R60 797 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 AAK1Q2M2I8 961 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 ZNF658BQ4V348 819 aaPredicted RBP16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 COQ5Q5HYK3 327 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 PRAMEF9Q5VWM5 478 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 RNF165Q6ZSG1 346 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 CHPFQ8IZ52 775 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 SLC22A15Q8IZD6 547 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 LRRC58Q96CX6 371 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 HOPXQ9BPY8 73 aaPredicted RBP16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 ZCCHC2Q9C0B9 1178 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms