RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 STSP08842 583 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 MTHFD2P13995 350 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 CCNCP24863 283 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 KRT20P35900 424 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 GDF5P43026 501 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 OAZ1P54368 228 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 CASP9P55211 416 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 HUNKP57058 714 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 LILRA4P59901 499 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 CREMQ03060 361 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 PWP1Q13610 501 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 KYAT1Q16773 422 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 PRSS36Q5K4E3 855 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 RGMBQ6NW40 437 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 ZNF549Q6P9A3 640 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 CEP68Q76N32 757 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 PLPPR4Q7Z2D5 763 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 VTCN1Q7Z7D3 282 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 PHYKPLQ8IUZ5 450 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 SLC38A6Q8IZM9 456 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 LRRC52Q8N7C0 313 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 BEND7Q8N7W2 519 aaPredicted RBP6.54□□□□□ -1.36
LMO3-235ENST00000616247 SIDT2Q8NBJ9 832 aaKnown RBP6.54□□□□□ -1.36
LMO3-235ENST00000616247 KBTBD8Q8NFY9 601 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 OR5H6Q8NGV6 325 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 JPH3Q8WXH2 748 aaPredicted RBP6.54□□□□□ -1.36
LMO3-235ENST00000616247 LINGO1Q96FE5 620 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 GFM1Q96RP9 751 aaKnown RBP6.54□□□□□ -1.36
LMO3-235ENST00000616247 CNPPD1Q9BV87 410 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 KATNAL1Q9BW62 490 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 SPATC1LQ9H0A9 340 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 POLR3BQ9NW08 1133 aaPredicted RBP6.54□□□□□ -1.36
LMO3-235ENST00000616247 QPCTLQ9NXS2 382 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 TAS2R16Q9NYV7 291 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 FBXO10Q9UK96 956 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 ASB1Q9Y576 335 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 COL5A3P25940 1745 aaPredicted RBP6.54□□□□□ -1.36
LMO3-235ENST00000616247 UPK3BL1B0FP48 263 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 UPK3BL2E5RIL1 263 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 H3BRB1 525 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 HAT1O14929 419 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 MAFKO60675 156 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 B3GALT4O96024 378 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 HPRP00739 348 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 NTRK1P04629 796 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 RPLP0P05388 317 aaKnown RBP6.54□□□□□ -1.36
LMO3-235ENST00000616247 WEE1P30291 646 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 RPP38P78345 283 aaKnown RBP6.54□□□□□ -1.36
LMO3-235ENST00000616247 SLC35A2P78381 396 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 RUNX1T1Q06455 604 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 SOX4Q06945 474 aaPredicted RBP6.54□□□□□ -1.36
LMO3-235ENST00000616247 GALNT1Q10472 559 aaPredicted RBP6.54□□□□□ -1.36
LMO3-235ENST00000616247 ZNF235Q14590 738 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 LRRC26Q2I0M4 334 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 RFX4Q33E94 735 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 FKBP1CQ5VVH2 108 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 SLC27A1Q6PCB7 646 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 ZNF438Q7Z4V0 828 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 ZFAND4Q86XD8 727 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 MIB1Q86YT6 1006 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 MICALL2Q8IY33 904 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 SPPL2AQ8TCT8 520 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 TRIB2Q92519 343 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 SNAPC3Q92966 411 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 PCED1BQ96HM7 432 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 SMIM14Q96QK8 99 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 TTPALQ9BTX7 342 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 REEP1Q9H902 201 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 SNTG1Q9NSN8 517 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 VNN3Q9NY84 501 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 MALT1Q9UDY8 824 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 SCN9AQ15858 1988 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 CCDC182A6NF36 153 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 CASTOR2A6NHX0 329 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 METTL15A6NJ78 407 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 UNCXA6NJT0 531 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 KMOO15229 486 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 SLC7A4O43246 635 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 TREHO43280 583 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 TMCC2O75069 709 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 SCO1O75880 301 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 TSPAN9O75954 239 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 MLYCDO95822 493 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 CCNYL3P0C7X3 344 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 DNAJB1P25685 340 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 CA5AP35218 305 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 HSPA7P48741 367 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 INPP1P49441 399 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 RENBPP51606 427 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 MVKQ03426 396 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 SLAMF1Q13291 335 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 CDK10Q15131 360 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 CARD16Q5EG05 197 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 SIRPB2Q5JXA9 342 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 IRAK1BP1Q5VVH5 260 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 LAIR1Q6GTX8 287 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 PNCKQ6P2M8 343 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 NOTUMQ6P988 496 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 DLEU7Q6UYE1 221 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 ZNF621Q6ZSS3 439 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms