RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 NDUFS3O75489 264 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 KIAA0754O94854 1291 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 MAGP20916 626 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 HALP42357 657 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 PLTPP55058 493 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 GPX6P59796 221 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 PDE1BQ01064 536 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 TSTA3Q13630 321 aaPredicted RBP5.52□□□□□ -1.53
CPNE3-208ENST00000614678 TYSND1Q2T9J0 566 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 PTCHD3Q3KNS1 767 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 ZDHHC20Q5W0Z9 365 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 WDR74Q6RFH5 385 aaPredicted RBP5.52□□□□□ -1.53
CPNE3-208ENST00000614678 DTX1Q86Y01 620 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 ZBED8Q8IZ13 594 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 KCNE4Q8WWG9 221 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 EXTL1Q92935 676 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 NKD1Q969G9 470 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 OR2A14Q96R47 310 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 SRPK1Q96SB4 655 aaKnown RBP5.52□□□□□ -1.53
CPNE3-208ENST00000614678 EBNA1BP2Q99848 306 aaKnown RBP5.52□□□□□ -1.53
CPNE3-208ENST00000614678 SPRY4Q9C004 299 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 ZCCHC2Q9C0B9 1178 aaKnown RBP5.52□□□□□ -1.53
CPNE3-208ENST00000614678 SRMSQ9H3Y6 488 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 SETXQ7Z333 2677 aaKnown RBP5.52□□□□□ -1.53
CPNE3-208ENST00000614678 FAM237BA0A1B0GVD1 139 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 LILRA5A6NI73 299 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 ARHGEF33A8MVX0 844 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 GPR89AB7ZAQ6 455 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 PSMD3O43242 534 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 DXOO77932 396 aaKnown RBP5.52□□□□□ -1.53
CPNE3-208ENST00000614678 GAS8O95995 478 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 C1QAP02745 245 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 GPR89BP0CG08 455 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 LIFP15018 202 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 GPLD1P80108 840 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 SYTL3Q4VX76 610 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 DNTTIP2Q5QJE6 756 aaKnown RBP5.52□□□□□ -1.53
CPNE3-208ENST00000614678 KIAA0930Q6ICG6 404 aaPredicted RBP5.52□□□□□ -1.53
CPNE3-208ENST00000614678 CDHR3Q6ZTQ4 885 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 OTOAQ7RTW8 1153 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 CCDC25Q86WR0 208 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 CEP97Q8IW35 865 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 MCUQ8NE86 351 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 SNIP1Q8TAD8 396 aaKnown RBP5.52□□□□□ -1.53
CPNE3-208ENST00000614678 CD200R1Q8TD46 325 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 EEF1AKMT1Q8WVE0 214 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.52□□□□□ -1.53
CPNE3-208ENST00000614678 MAIP1Q8WWC4 291 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 ULK4Q96C45 1275 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 TMEM74Q96NL1 305 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 SPRTNQ9H040 489 aaPredicted RBP5.52□□□□□ -1.53
CPNE3-208ENST00000614678 DHCR7Q9UBM7 475 aaKnown RBP5.52□□□□□ -1.53
CPNE3-208ENST00000614678 FBXO5Q9UKT4 447 aa5.52□□□□□ -1.53
CPNE3-208ENST00000614678 GOLGA6L10A0A0M3HER8 536 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 A0A1W2PPV9 198 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 OR2W5A6NFC9 320 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 STK17BO94768 372 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 RALBP11234 206 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 UGT2B7P16662 529 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 NR1D1P20393 614 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 PHKG1Q16816 387 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 TEDDM1Q5T9Z0 273 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 PAQR3Q6TCH7 311 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 AMIGO1Q86WK6 493 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 AGBL5Q8NDL9 886 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 OR1L3Q8NH93 324 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 ANKRD49Q8WVL7 239 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 SLCO2A1Q92959 643 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 ESAMQ96AP7 390 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 THSD1Q9NS62 852 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 SAMD15Q9P1V8 674 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 ANAPC5Q9UJX4 755 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 FAM169AQ9Y6X4 670 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 MYO18BQ8IUG5 2567 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 IGKV1-8A0A0C4DH67 115 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 CFAP99D6REC4 459 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 H3BMM5 538 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 CES2O00748 559 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 CTSVO60911 334 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 DNAJB5O75953 348 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 OR56A5P0C7T3 313 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 ST13P50502 369 aaKnown RBP5.51□□□□□ -1.53
CPNE3-208ENST00000614678 PCBP4P57723 403 aaKnown RBP5.51□□□□□ -1.53
CPNE3-208ENST00000614678 SOWAHCQ53LP3 525 aaPredicted RBP5.51□□□□□ -1.53
CPNE3-208ENST00000614678 C1orf189Q5VU69 101 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 DUPD1Q68J44 220 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 FRMPD2BQ6IN97 320 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 CYHR1Q6ZMK1 362 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 SHISA6Q6ZSJ9 500 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 CLEC14AQ86T13 490 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 SLC22A15Q8IZD6 547 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.51□□□□□ -1.53
CPNE3-208ENST00000614678 OR5K2Q8NHB8 316 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 TMEM159Q96B96 161 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 PYCR2Q96C36 320 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 CCDC138Q96M89 665 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 MIPEPQ99797 713 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 ULBP3Q9BZM4 244 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 FGF21Q9NSA1 209 aa5.51□□□□□ -1.53
CPNE3-208ENST00000614678 HOMER3Q9NSC5 361 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms