RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 ADAMTS6Q9UKP5 1117 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 RNF112Q9ULX5 631 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 MUC6Q6W4X9 2439 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 RALGAPA1Q6GYQ0 2036 aa14.32□□□□□ -0.12
CD48-203ENST00000613788 SYCE1LA8MT33 242 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 ARHGEF33A8MVX0 844 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 SIGLEC6O43699 453 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 SPAG7O75391 227 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 SYF2O95926 243 aaKnown RBP14.31□□□□□ -0.12
CD48-203ENST00000613788 AP1S2P56377 157 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 UBE2IP63279 158 aaKnown RBP14.31□□□□□ -0.12
CD48-203ENST00000613788 HHEXQ03014 270 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 CCDC153Q494R4 210 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 DUS1LQ6P1R4 473 aaKnown RBP14.31□□□□□ -0.12
CD48-203ENST00000613788 SBSNQ6UWP8 590 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 OR6C4Q8NGE1 309 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 PTERQ96BW5 349 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 CAMK1GQ96NX5 476 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.31□□□□□ -0.12
CD48-203ENST00000613788 MRPL46Q9H2W6 279 aaKnown RBP14.31□□□□□ -0.12
CD48-203ENST00000613788 RDH14Q9HBH5 336 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 SLC40A1Q9NP59 571 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 KCNK9Q9NPC2 374 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 MED4Q9NPJ6 270 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 EVA1BQ9NVM1 165 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 IKZF3Q9UKT9 509 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 PDE10AQ9Y233 779 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 TDRKHQ9Y2W6 561 aaKnown RBP14.31□□□□□ -0.12
CD48-203ENST00000613788 OARD1Q9Y530 152 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 FRYLO94915 3013 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 C4orf47A7E2U8 309 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 TYROBPO43914 113 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 KERAO60938 352 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 TOP3BO95985 862 aaKnown RBP14.31□□□□□ -0.12
CD48-203ENST00000613788 CREB1P16220 341 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 MAZP56270 477 aaKnown RBP14.31□□□□□ -0.12
CD48-203ENST00000613788 PRKG2Q13237 762 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 NR0B2Q15466 257 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 OR4D1Q15615 310 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 TTMPQ5BVD1 217 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 TECRLQ5HYJ1 363 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 N4BP2L1Q5TBK1 243 aaPredicted RBP14.31□□□□□ -0.12
CD48-203ENST00000613788 SFTPA2Q8IWL1 248 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 SLC35F3Q8IY50 421 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 RAB42Q8N4Z0 105 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 KYQ8NBH2 561 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 OR9A1PQ8NGU1 263 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 RHBDD1Q8TEB9 315 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 SETD7Q8WTS6 366 aaKnown RBP14.31□□□□□ -0.12
CD48-203ENST00000613788 DLG3Q92796 817 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 APOLD1Q96LR9 279 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 CCDC138Q96M89 665 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 HGH1Q9BTY7 390 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 KIR3DX1Q9H7L2 352 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 LNPEPQ9UIQ6 1025 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 PADI4Q9UM07 663 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 PLLPQ9Y342 182 aa14.31□□□□□ -0.12
CD48-203ENST00000613788 RHPN2P1A8MT19 583 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 PRPF4O43172 522 aaKnown RBP eCLIP14.3□□□□□ -0.12
CD48-203ENST00000613788 NUDT21O43809 227 aaKnown RBP14.3□□□□□ -0.12
CD48-203ENST00000613788 S100BP04271 92 aaPredicted RBP14.3□□□□□ -0.12
CD48-203ENST00000613788 ANXA5P08758 320 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 CD59P13987 128 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 GLB1P16278 677 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 HSD17B2P37059 387 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 BDKRB1P46663 353 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 DUSP3P51452 185 aaPredicted RBP14.3□□□□□ -0.12
CD48-203ENST00000613788 CDKL1Q00532 357 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 TGFBIQ15582 683 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 PHKG1Q16816 387 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 PPP1R3AQ16821 1122 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 CDKL4Q5MAI5 379 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.3□□□□□ -0.12
CD48-203ENST00000613788 C16orf46Q6P387 395 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 CDHR3Q6ZTQ4 885 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 TCP10LQ8TDR4 215 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 ATOH8Q96SQ7 321 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 UCK1Q9HA47 277 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 ARL15Q9NXU5 204 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 UTP6Q9NYH9 597 aaKnown RBP14.3□□□□□ -0.12
CD48-203ENST00000613788 CD274Q9NZQ7 290 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 LRIT1Q9P2V4 623 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 XPR1Q9UBH6 696 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 TMCO1Q9UM00 188 aa14.3□□□□□ -0.12
CD48-203ENST00000613788 ZFC3H1O60293 1989 aaKnown RBP14.29□□□□□ -0.12
CD48-203ENST00000613788 PRAMEF33A0A0G2JMD5 474 aa14.29□□□□□ -0.12
CD48-203ENST00000613788 ZNF839A8K0R7 811 aa14.29□□□□□ -0.12
CD48-203ENST00000613788 MYO1CO00159 1063 aa14.29□□□□□ -0.12
CD48-203ENST00000613788 PPM1DO15297 605 aa14.29□□□□□ -0.12
CD48-203ENST00000613788 TM9SF1O15321 606 aa14.29□□□□□ -0.12
CD48-203ENST00000613788 ZW10O43264 779 aa14.29□□□□□ -0.12
CD48-203ENST00000613788 GUCA1CO95843 209 aa14.29□□□□□ -0.12
CD48-203ENST00000613788 TPBGLP0DKB5 382 aa14.29□□□□□ -0.12
CD48-203ENST00000613788 TAC1P20366 129 aa14.29□□□□□ -0.12
CD48-203ENST00000613788 KCNC1P48547 511 aa14.29□□□□□ -0.12
CD48-203ENST00000613788 GPR18Q14330 331 aa14.29□□□□□ -0.12
CD48-203ENST00000613788 PLCL1Q15111 1095 aa14.29□□□□□ -0.12
CD48-203ENST00000613788 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.29□□□□□ -0.12
CD48-203ENST00000613788 STPG1Q5TH74 334 aa14.29□□□□□ -0.12
CD48-203ENST00000613788 TMEM26Q6ZUK4 368 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms