RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 QKIQ96PU8 341 aaKnown RBP eCLIP4.88□□□□□ -1.63
SYCP1-209ENST00000613524 KLF6Q99612 283 aaPredicted RBP4.88□□□□□ -1.63
SYCP1-209ENST00000613524 BOCQ9BWV1 1114 aa4.88□□□□□ -1.63
SYCP1-209ENST00000613524 C1QTNF7Q9BXJ2 289 aa4.88□□□□□ -1.63
SYCP1-209ENST00000613524 PRDM8Q9NQV8 689 aa4.88□□□□□ -1.63
SYCP1-209ENST00000613524 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.88□□□□□ -1.63
SYCP1-209ENST00000613524 PCYOX1Q9UHG3 505 aa4.88□□□□□ -1.63
SYCP1-209ENST00000613524 GPR34Q9UPC5 381 aa4.88□□□□□ -1.63
SYCP1-209ENST00000613524 FANCMQ8IYD8 2048 aa4.88□□□□□ -1.63
SYCP1-209ENST00000613524 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 C1QTNF9BB2RNN3 333 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 TRAFD1O14545 582 aaPredicted RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 YY2O15391 372 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 TMPRSS2O15393 492 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 AQP9O43315 295 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 PHF2O75151 1096 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 TIPRLO75663 272 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 TRIM16O95361 564 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 PRAMEF1O95521 474 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 LDOC1O95751 146 aaPredicted RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 EML2O95834 649 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 FUCA1P04066 466 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 C1QTNF9P0C862 333 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 CD59P13987 128 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 TGM2P21980 687 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 CA4P22748 312 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 FPR2P25090 351 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 MGAT1P26572 445 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 NXPH1P58417 271 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 IFFO1Q0D2I5 559 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 PUM1Q14671 1186 aaKnown RBP eCLIP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 PLCL1Q15111 1095 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 E2F5Q15329 346 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 SLC1A5Q15758 541 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 BBS9Q3SYG4 887 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 ANKRD22Q5VYY1 191 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 SLC23A3Q6PIS1 610 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 C19orf48Q6RUI8 117 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 BZW1Q7L1Q6 419 aaKnown RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 HOOK3Q86VS8 718 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 PARGQ86W56 976 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 TRIM48Q8IWZ4 208 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 FAM20CQ8IXL6 584 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 AGGF1Q8N302 714 aaeCLIP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 OR2C3Q8N628 320 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 ATG16L2Q8NAA4 619 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 ZNF548Q8NEK5 533 aaPredicted RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 CADM4Q8NFZ8 388 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 CEP76Q8TAP6 659 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 SCRN2Q96FV2 425 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 APOLD1Q96LR9 279 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 CCDC74BQ96LY2 380 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 TBATAQ96M53 351 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 FANCD2OSQ96PS1 177 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 MIPEPQ99797 713 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 TBL1YQ9BQ87 522 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 ORAI3Q9BRQ5 295 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 LRRC61Q9BV99 259 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 HDAC8Q9BY41 377 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 SLC25A51Q9H1U9 297 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 PREBQ9HCU5 417 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 CHRAC1Q9NRG0 131 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 PHPT1Q9NRX4 125 aaPredicted RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 SCML1Q9UN30 329 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 CRYL1Q9Y2S2 319 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 CENPEQ02224 2701 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 MIF4GDA9UHW6 222 aaKnown RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 RIPK2O43353 540 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 LIASO43766 372 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 OR1I1O60431 355 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 MTA2O94776 668 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 PAPSS2O95340 614 aaPredicted RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 GSTA1P08263 222 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 RPL22P35268 128 aaKnown RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 PREPP48147 710 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 HK3P52790 923 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 PRAMEP78395 509 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 CDK3Q00526 305 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 C19orf57Q0VDD7 668 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 EIF2B5Q13144 721 aaKnown RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 CYP1B1Q16678 543 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 P3H1Q32P28 736 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 GALNTL6Q49A17 601 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 AFMIDQ63HM1 303 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 PNCKQ6P2M8 343 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 EFL1Q7Z2Z2 1120 aaKnown RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 GALNT13Q8IUC8 556 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 MPP5Q8N3R9 675 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 KYQ8NBH2 561 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 PPHLN1Q8NEY8 458 aaKnown RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 OR56A4Q8NGH8 313 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 NETO1Q8TDF5 533 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 DNASE2BQ8WZ79 361 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 ART4Q93070 314 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 ISG20Q96AZ6 181 aaKnown RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 TBC1D20Q96BZ9 403 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 GRAMD1AQ96CP6 724 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 ERP27Q96DN0 273 aa4.87□□□□□ -1.63
SYCP1-209ENST00000613524 IMP4Q96G21 291 aaKnown RBP4.87□□□□□ -1.63
SYCP1-209ENST00000613524 WDR92Q96MX6 357 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms