RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 GPR65Q8IYL9 337 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 SMAP2Q8WU79 429 aaPredicted RBP8.63□□□□□ -1.03
TTC28-208ENST00000612946 COMMD3Q9UBI1 195 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 VWA7Q9Y334 891 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 PCYT1BQ9Y5K3 369 aaPredicted RBP8.63□□□□□ -1.03
TTC28-208ENST00000612946 NUBP2Q9Y5Y2 271 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 TPH1P17752 444 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 FOXN2P32314 431 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 PLK1P53350 603 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 MTMR2Q13614 643 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 OR52E8Q6IFG1 317 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 OR51D1Q8NGF3 324 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 ENAMQ9NRM1 1142 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 A0A1B0GVM2 712 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 CHURC1-FNTBB4DL54 471 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 ATP6AP2O75787 350 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 JAM2P57087 298 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 VAMP2P63027 116 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 GXYLT1Q4G148 440 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 IL23RQ5VWK5 629 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 COQ8AQ8NI60 647 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 CD300LFQ8TDQ1 290 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 FCAMRQ8WWV6 532 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 LRRC58Q96CX6 371 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 PPP1R16BQ96T49 567 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 MECRQ9BV79 373 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 TLE6Q9H808 572 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 SNX10Q9Y5X0 201 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 SNCAIPQ9Y6H5 919 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 TUBAL3A6NHL2 446 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 KCNU1A8MYU2 1149 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 PLATP00750 562 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 KELP23276 732 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 SSTR3P32745 418 aaPredicted RBP8.63□□□□□ -1.03
TTC28-208ENST00000612946 PTGIRP43119 386 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 PSMA6P60900 246 aaKnown RBP8.63□□□□□ -1.03
TTC28-208ENST00000612946 HERVK_113P63132 956 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 LAPTM5Q13571 262 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 PDIA6Q15084 440 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 PAPD4Q6PIY7 484 aaKnown RBP8.63□□□□□ -1.03
TTC28-208ENST00000612946 TRIM48Q8IWZ4 208 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 SLC13A3Q8WWT9 602 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 ASB13Q8WXK3 278 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 TAAR8Q969N4 342 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 TMEM143Q96AN5 459 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 RAD51AP1Q96B01 352 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 CCDC3Q9BQI4 270 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 ERVK-6Q9BXR3 956 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 DUSP16Q9BY84 665 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 TAS2R10Q9NYW0 307 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.63□□□□□ -1.03
TTC28-208ENST00000612946 ZNHIT2Q9UHR6 403 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 ZMYM5Q9UJ78 669 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 ERVK-19Q9WJR5 959 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 FER1L6Q2WGJ9 1857 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 TOR1BO14657 336 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 TO15178 435 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 PRAMEF12O95522 483 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 AGR2O95994 175 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 ETFAP13804 333 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 BUD31P41223 144 aaPredicted RBP8.63□□□□□ -1.03
TTC28-208ENST00000612946 PRR5P85299 388 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 PRKCDQ05655 676 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 METTL11BQ5VVY1 283 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 GTF2IRD2BQ6EKJ0 949 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 ZNF529Q6P280 563 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 XKR5Q6UX68 686 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 CERS6Q6ZMG9 384 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 GTF2IRD2Q86UP8 949 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 LNX2Q8N448 690 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 CHST13Q8NET6 341 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 OR52K1Q8NGK4 314 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 HSFY1Q96LI6 401 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 ZNF597Q96LX8 424 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 POLR2J3Q9H1A7 115 aaKnown RBP8.63□□□□□ -1.03
TTC28-208ENST00000612946 MEGF6O75095 1541 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 DCDC2CA8MYV0 355 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 SRCP12931 536 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 RALGPS1Q5JS13 557 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 SSX9Q7RTT3 188 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.62□□□□□ -1.03
TTC28-208ENST00000612946 OSTF1Q92882 214 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 PPCDCQ96CD2 204 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 TXNDC15Q96J42 360 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 SLC7A5P2Q9GIP4 190 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 ICMTO60725 284 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 VEGFCP49767 419 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 IRF8Q02556 426 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 RNF31Q96EP0 1072 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 IDI2Q9BXS1 227 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 OXSMQ9NWU1 459 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 URADA6NGE7 173 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 MAGP20916 626 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 NOS2P35228 1153 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 DNASE1L1P49184 302 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 ALDH7A1P49419 539 aaKnown RBP8.62□□□□□ -1.03
TTC28-208ENST00000612946 MC2RQ01718 297 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 RPL13AP3Q6NVV1 102 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 HSDL2Q6YN16 418 aa8.62□□□□□ -1.03
TTC28-208ENST00000612946 PRSS48Q7RTY5 328 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms