RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 ARL5AQ9Y689 179 aa16.58■□□□□ 0.24
CSNK1E-215ENST00000612795 ITPR3Q14573 2671 aa16.58■□□□□ 0.24
CSNK1E-215ENST00000612795 HIVEP1P15822 2718 aa16.58■□□□□ 0.24
CSNK1E-215ENST00000612795 CCDC78A2IDD5 438 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 KRT1P04264 644 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 HTR1EP28566 365 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 ZIC1Q15915 447 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 TUBB8Q3ZCM7 444 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 VWA2Q5GFL6 755 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 LINC00696Q6ZRV3 163 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 MRGPRGQ86SM5 289 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 VSIG1Q86XK7 387 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 OR4K2Q8NGD2 314 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 TFB1MQ8WVM0 346 aaKnown RBP16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 CTNNBL1Q8WYA6 563 aaPredicted RBP16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 DLG3Q92796 817 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 FKBP10Q96AY3 582 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 THOC3Q96J01 351 aaKnown RBP16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 VPS50Q96JG6 964 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 NAT10Q9H0A0 1025 aaKnown RBP16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 OR52A5Q9H2C5 316 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 VPS37BQ9H9H4 285 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 LMBRD1Q9NUN5 540 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 FKBPLQ9UIM3 349 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 ICKQ9UPZ9 632 aa16.57■□□□□ 0.24
CSNK1E-215ENST00000612795 TRGV8A0A0C4DH27 118 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 A0A0J9YY10 115 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 C17orf113A0A1B0GUU1 675 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 C2orf81A6NN90 581 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 SOCS6O14544 535 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 CTSBP07858 339 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 H2AFZP0C0S5 128 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 ALAS2P22557 587 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 SHMT2P34897 504 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 GABRA4P48169 554 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 CD151P48509 253 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 TMPRSS15P98073 1019 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 MPP3Q13368 585 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 MESDQ14696 234 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 RBBP7Q16576 425 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 FIGNQ5HY92 759 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 RPUSD3Q6P087 351 aaKnown RBP16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 ISLR2Q6UXK2 745 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 GFRALQ6UXV0 394 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 H2AFVQ71UI9 128 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 BZW1Q7L1Q6 419 aaKnown RBP16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 ZNF808Q8N4W9 903 aaPredicted RBP16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 OR1N1Q8NGS0 311 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 SYN2Q92777 582 aaPredicted RBP16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 ULK4Q96C45 1275 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 CCDC120Q96HB5 630 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 OXNAD1Q96HP4 312 aaPredicted RBP16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 COPS8Q99627 209 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 MRM3Q9HC36 420 aaKnown RBP16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 HS3ST3B1Q9Y662 390 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 CPAMD8Q8IZJ3 1885 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 PCNX1Q96RV3 2341 aa16.56■□□□□ 0.24
CSNK1E-215ENST00000612795 CACNA1CQ13936 2221 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 A0A1B0GTH6 734 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 C3orf70A6NLC5 250 aaPredicted RBP16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 PCDH17O14917 1159 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 PIM1P11309 404 aaPredicted RBP16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 ATP1B2P14415 290 aaPredicted RBP16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 PDHA2P29803 388 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 ARG2P78540 354 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 WASHC5Q12768 1159 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 MFAP5Q13361 173 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 BOP1Q14137 746 aaKnown RBP16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 MTFR2Q6P444 385 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 TTLL10Q6ZVT0 673 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 CATSPER1Q8NEC5 780 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 HEXDCQ8WVB3 486 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 NR4A3Q92570 626 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 TFGQ92734 400 aaPredicted RBP16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 OR2A14Q96R47 310 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 FCRL5Q96RD9 977 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 CHRNA10Q9GZZ6 450 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 WDR54Q9H977 334 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 SLC22A11Q9NSA0 550 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 PLCL2Q9UPR0 1127 aa16.55■□□□□ 0.24
CSNK1E-215ENST00000612795 CCL21O00585 134 aa16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 CHRM5P08912 532 aaPredicted RBP16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 ITGALP20701 1170 aa16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 TDGF1P3P51864 188 aa16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 TAF1AQ15573 450 aaPredicted RBP16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 ZNF630Q2M218 657 aaPredicted RBP16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 KIRREL2Q6UWL6 708 aa16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 UNC5AQ6ZN44 842 aa16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 SHISA6Q6ZSJ9 500 aa16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 PID1Q7Z2X4 250 aa16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 DENND1AQ8TEH3 1009 aa16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 RNF25Q96BH1 459 aaPredicted RBP16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 NAP1L5Q96NT1 182 aaPredicted RBP16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 SPSB2Q99619 263 aa16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 TRIM56Q9BRZ2 755 aaKnown RBP16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 TRIM8Q9BZR9 551 aa16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 SOX17Q9H6I2 414 aaPredicted RBP16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 SAE1Q9UBE0 346 aaPredicted RBP16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 SH3BGRL2Q9UJC5 107 aa16.54■□□□□ 0.24
CSNK1E-215ENST00000612795 A0A1B0GX78 115 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms