RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 KIAA1614Q5VZ46 1190 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 USP45Q70EL2 814 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 SHKBP1Q8TBC3 707 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 GPR152Q8TDT2 470 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 GANCQ8TET4 914 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 GTPBP3Q969Y2 492 aaKnown RBP14.37□□□□□ -0.11
VPS36-207ENST00000611132 DNAJC11Q9NVH1 559 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 USP54Q70EL1 1684 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 TTC24A2A3L6 582 aaPredicted RBP14.37□□□□□ -0.11
VPS36-207ENST00000611132 INSIG1O15503 277 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 MT-ND2P03891 347 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 CD1DP15813 335 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 DCKP27707 260 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 MAPK8P45983 427 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 ASMTP46597 345 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 RORCP51449 518 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 PTSQ03393 145 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 SRSF11Q05519 484 aaKnown RBP14.37□□□□□ -0.11
VPS36-207ENST00000611132 TUSC3Q13454 348 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 C5orf22Q49AR2 442 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 CIR1Q86X95 450 aaPredicted RBP14.37□□□□□ -0.11
VPS36-207ENST00000611132 OR7D4Q8NG98 312 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 OR8J3Q8NGG0 315 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 CRELD1Q96HD1 420 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 IRF2BPLQ9H1B7 796 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 CCDC177Q9NQR7 707 aaPredicted RBP14.37□□□□□ -0.11
VPS36-207ENST00000611132 SACM1LQ9NTJ5 587 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 SLC25A13Q9UJS0 675 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 NUMBLQ9Y6R0 609 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 TRPM3Q9HCF6 1732 aaPredicted RBP14.37□□□□□ -0.11
VPS36-207ENST00000611132 HMX2A2RU54 273 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 ACOT8O14734 319 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 MATN4O95460 622 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 OR4Q2P0C623 313 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 MAPKAPK2P49137 400 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 STC1P52823 247 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 NUDT6P53370 316 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 SH3BP2P78314 561 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 TEAD4Q15561 434 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 ANKDD1AQ495B1 522 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 DDI2Q5TDH0 399 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 FAM92BQ6ZTR7 304 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 PIWIL3Q7Z3Z3 882 aaKnown RBP14.37□□□□□ -0.11
VPS36-207ENST00000611132 ASCC1Q8N9N2 400 aaKnown RBP14.37□□□□□ -0.11
VPS36-207ENST00000611132 OR4F6Q8NGB9 312 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 RHEBL1Q8TAI7 183 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 SH3YL1Q96HL8 342 aaPredicted RBP14.37□□□□□ -0.11
VPS36-207ENST00000611132 ITM2CQ9NQX7 267 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 STOML2Q9UJZ1 356 aa14.37□□□□□ -0.11
VPS36-207ENST00000611132 H0YC42 278 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 J3KR12 359 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 DIRAS1O95057 198 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 OXTRP30559 389 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 GRK4P32298 578 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 ALDH7A1P49419 539 aaKnown RBP14.36□□□□□ -0.11
VPS36-207ENST00000611132 CD47Q08722 323 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 CES5AQ6NT32 575 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 TAPT1Q6NXT6 567 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 C16orf62Q7Z3J2 963 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 FGD2Q7Z6J4 655 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 CTU1Q7Z7A3 348 aaKnown RBP14.36□□□□□ -0.11
VPS36-207ENST00000611132 DPP10Q8N608 796 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 TBC1D15Q8TC07 691 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 CHPT1Q8WUD6 406 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 KCNC2Q96PR1 638 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 ZFYVE1Q9HBF4 777 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 CPNE5Q9HCH3 593 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 MIOSQ9NXC5 875 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 KCNH4Q9UQ05 1017 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 SSNA1O43805 119 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 DPY19L1Q2PZI1 675 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 IFI44LQ53G44 452 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 HECTD3Q5T447 861 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 OR10G2Q8NGC3 310 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 OR13J1Q8NGT2 312 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 SLC38A4Q969I6 547 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 COL21A1Q96P44 957 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 PHOX2BQ99453 314 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 SMOQ99835 787 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 SLC30A2Q9BRI3 323 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 NAA50Q9GZZ1 169 aaKnown RBP14.36□□□□□ -0.11
VPS36-207ENST00000611132 FNIP2Q9P278 1114 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 CPQQ9Y646 472 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 GOLGA4Q13439 2230 aaKnown RBP14.36□□□□□ -0.11
VPS36-207ENST00000611132 ECM29Q5VYK3 1845 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 LRRC14BA6NHZ5 514 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 CLIC1O00299 241 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 B4GAT1O43505 415 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 DYRK3O43781 588 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 CLDN11O75508 207 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 PRKCGP05129 697 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 TACR2P21452 398 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 CYP4F8P98187 520 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 TAF10Q12962 218 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 PRAMEF19Q5SWL8 479 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 CCBE1Q6UXH8 406 aaPredicted RBP14.36□□□□□ -0.11
VPS36-207ENST00000611132 DEF8Q6ZN54 512 aa14.36□□□□□ -0.11
VPS36-207ENST00000611132 IFNLR1Q8IU57 520 aaPredicted RBP14.36□□□□□ -0.11
VPS36-207ENST00000611132 CLP1Q92989 425 aaKnown RBP14.36□□□□□ -0.11
VPS36-207ENST00000611132 PPCDCQ96CD2 204 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms