RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, human

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-223	ENST00000610488	TMEM151A	Q8N4L1	468 aa		13.28	□□□□□ -0.28
PPHLN1-223	ENST00000610488	KY	Q8NBH2	561 aa		13.28	□□□□□ -0.28
PPHLN1-223	ENST00000610488	KCNE4	Q8WWG9	221 aa		13.28	□□□□□ -0.28
PPHLN1-223	ENST00000610488	SREK1	Q8WXA9	508 aa	Known RBP	13.28	□□□□□ -0.28
PPHLN1-223	ENST00000610488	ULK4	Q96C45	1275 aa		13.28	□□□□□ -0.28
PPHLN1-223	ENST00000610488	CCDC97	Q96F63	343 aa	Predicted RBP	13.28	□□□□□ -0.28
PPHLN1-223	ENST00000610488	MRPL57	Q9BQC6	102 aa	Known RBP	13.28	□□□□□ -0.28
PPHLN1-223	ENST00000610488	APOO	Q9BUR5	198 aa		13.28	□□□□□ -0.28
PPHLN1-223	ENST00000610488	SPATA16	Q9BXB7	569 aa		13.28	□□□□□ -0.28
PPHLN1-223	ENST00000610488	MRPL46	Q9H2W6	279 aa	Known RBP	13.28	□□□□□ -0.28
PPHLN1-223	ENST00000610488	FAM83D	Q9H4H8	585 aa		13.28	□□□□□ -0.28
PPHLN1-223	ENST00000610488	SYTL2	Q9HCH5	934 aa		13.28	□□□□□ -0.28
PPHLN1-223	ENST00000610488	THSD1	Q9NS62	852 aa		13.28	□□□□□ -0.28
PPHLN1-223	ENST00000610488	RAD18	Q9NS91	495 aa		13.28	□□□□□ -0.28
PPHLN1-223	ENST00000610488	TRMT6	Q9UJA5	497 aa	Known RBP	13.28	□□□□□ -0.28
PPHLN1-223	ENST00000610488	PADI4	Q9UM07	663 aa		13.28	□□□□□ -0.28
PPHLN1-223	ENST00000610488	MED16	Q9Y2X0	877 aa		13.28	□□□□□ -0.28
PPHLN1-223	ENST00000610488	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	AGAP14	A8MT82	685 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	EBAG9	O00559	213 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SERPINE1	P05121	402 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	RALB	P11234	206 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	TFEB	P19484	476 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	CHRM3	P20309	590 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	RPS3	P23396	243 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ETV3	P41162	512 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	DCDC1	P59894	354 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SRP54	P61011	504 aa	Known RBP	13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ACAP2	Q15057	778 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ACOX1	Q15067	660 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	PAQR3	Q6TCH7	311 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	GKN2	Q86XP6	184 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ARL10	Q8N8L6	244 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	PLA2G15	Q8NCC3	412 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	THOC1	Q96FV9	657 aa	Known RBP	13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	PDXP	Q96GD0	296 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	WDR92	Q96MX6	357 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	WDR70	Q9NW82	654 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ZDHHC3	Q9NYG2	299 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	GALP	Q9UBC7	116 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	MOSPD1	Q9UJG1	213 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	GNPTG	Q9UJJ9	305 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	GPR34	Q9UPC5	381 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ENTPD2	Q9Y5L3	495 aa		13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	OAS3	Q9Y6K5	1087 aa	Known RBP	13.27	□□□□□ -0.29
PPHLN1-223	ENST00000610488	UNC13C	Q8NB66	2214 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	IQCF5	A8MTL0	148 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	TARM1	B6A8C7	271 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	KLK10	O43240	276 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	TRIM13	O60858	407 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	TNF	P01375	233 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	RBP1	P09455	135 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	CD1D	P15813	335 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	CD9	P21926	228 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ERVPABLB-1	P60509	514 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ITIH4	Q14624	930 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	UGT3A1	Q6NUS8	523 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ANKS4B	Q8N8V4	417 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SIDT2	Q8NBJ9	832 aa	Known RBP	13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	NAT14	Q8WUY8	206 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SLC39A7	Q92504	469 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	KCNJ9	Q92806	393 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SCAMP4	Q969E2	229 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	CCDC74A	Q96AQ1	378 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SGF29	Q96ES7	293 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SLC30A3	Q99726	388 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ABCG8	Q9H221	673 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ZNF395	Q9H8N7	513 aa	Predicted RBP	13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	CPNE5	Q9HCH3	593 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SARS2	Q9NP81	518 aa	Known RBP	13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ASCL3	Q9NQ33	180 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	OXSM	Q9NWU1	459 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488	PRSS21	Q9Y6M0	314 aa		13.26	□□□□□ -0.29
PPHLN1-223	ENST00000610488		A0A1W2PNU3	283 aa	Predicted RBP	13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	PMS2P1	A4D2B8	440 aa		13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	RGSL1	A5PLK6	1076 aa		13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	PSMD11	O00231	422 aa		13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	CACNB4	O00305	520 aa	Predicted RBP	13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ZBTB14	O43829	449 aa		13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	DLX3	O60479	287 aa		13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SNN	O75324	88 aa	Predicted RBP	13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	H2AFY	O75367	372 aa	Known RBP	13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	DXO	O77932	396 aa	Known RBP	13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	RECQL5	O94762	991 aa	Predicted RBP	13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	TROVE2	P10155	538 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ITGB6	P18564	788 aa		13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	GRK2	P25098	689 aa		13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SKIV2L2	P42285	1042 aa	Known RBP	13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SLC1A6	P48664	564 aa		13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	TMPRSS3	P57727	454 aa		13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	OCRL	Q01968	901 aa		13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	LIPM	Q5VYY2	423 aa		13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	TECPR1	Q7Z6L1	1165 aa		13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SDR16C5	Q8N3Y7	309 aa		13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	NKAP	Q8N5F7	415 aa	Known RBP	13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	GIMAP7	Q8NHV1	300 aa		13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	CD200R1	Q8TD46	325 aa		13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	HIC2	Q96JB3	615 aa		13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	C7orf26	Q96N11	449 aa		13.25	□□□□□ -0.29
PPHLN1-223	ENST00000610488	COPS8	Q99627	209 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms