RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 OR8J3Q8NGG0 315 aa11.68□□□□□ -0.54
USP6NL-206ENST00000609853 DNAJB14Q8TBM8 379 aa11.68□□□□□ -0.54
USP6NL-206ENST00000609853 NAT14Q8WUY8 206 aa11.68□□□□□ -0.54
USP6NL-206ENST00000609853 SKA2Q8WVK7 121 aaPredicted RBP11.68□□□□□ -0.54
USP6NL-206ENST00000609853 ING5Q8WYH8 240 aa11.68□□□□□ -0.54
USP6NL-206ENST00000609853 SMG7Q92540 1137 aaKnown RBP11.68□□□□□ -0.54
USP6NL-206ENST00000609853 ELMO1Q92556 727 aa11.68□□□□□ -0.54
USP6NL-206ENST00000609853 SCAMP4Q969E2 229 aa11.68□□□□□ -0.54
USP6NL-206ENST00000609853 POP5Q969H6 163 aaKnown RBP11.68□□□□□ -0.54
USP6NL-206ENST00000609853 FBXL8Q96CD0 374 aa11.68□□□□□ -0.54
USP6NL-206ENST00000609853 SH3GL1Q99961 368 aa11.68□□□□□ -0.54
USP6NL-206ENST00000609853 RIOK2Q9BVS4 552 aaKnown RBP11.68□□□□□ -0.54
USP6NL-206ENST00000609853 FAM192AQ9GZU8 254 aa11.68□□□□□ -0.54
USP6NL-206ENST00000609853 NANOGQ9H9S0 305 aa11.68□□□□□ -0.54
USP6NL-206ENST00000609853 DNAJC11Q9NVH1 559 aa11.68□□□□□ -0.54
USP6NL-206ENST00000609853 CD84Q9UIB8 345 aa11.68□□□□□ -0.54
USP6NL-206ENST00000609853 POLR3HQ9Y535 204 aaPredicted RBP11.68□□□□□ -0.54
USP6NL-206ENST00000609853 MYO7AQ13402 2215 aa11.68□□□□□ -0.54
USP6NL-206ENST00000609853 PRRC2BQ5JSZ5 2229 aaKnown RBP11.67□□□□□ -0.54
USP6NL-206ENST00000609853 MKI67P46013 3256 aaKnown RBP11.67□□□□□ -0.54
USP6NL-206ENST00000609853 WNT9AO14904 365 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 RNASEH1O60930 286 aaKnown RBP11.67□□□□□ -0.54
USP6NL-206ENST00000609853 ATG13O75143 517 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 TULP3O75386 442 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 GSTM1P09488 218 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 UBTFL6P0CB48 400 aaPredicted RBP11.67□□□□□ -0.54
USP6NL-206ENST00000609853 PRPS2P11908 318 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 ZNF26P17031 533 aaPredicted RBP11.67□□□□□ -0.54
USP6NL-206ENST00000609853 ATP6V1B2P21281 511 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 MAP4P27816 1152 aaKnown RBP11.67□□□□□ -0.54
USP6NL-206ENST00000609853 CHN2P52757 468 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 RPL38P63173 70 aaKnown RBP11.67□□□□□ -0.54
USP6NL-206ENST00000609853 GSTM4Q03013 218 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 ELP6Q0PNE2 266 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 CBX2Q14781 532 aaPredicted RBP11.67□□□□□ -0.54
USP6NL-206ENST00000609853 MTX3Q5HYI7 312 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 LRRC73Q5JTD7 316 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 DLEU7Q6UYE1 221 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 LIPIQ6XZB0 460 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 ZNF765Q7L2R6 523 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 DET1Q7L5Y6 550 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 ERMP1Q7Z2K6 904 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 ETFBKMTQ8IXQ9 262 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 KIAA2013Q8IYS2 634 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 RGL4Q8IZJ4 473 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 TNIP2Q8NFZ5 429 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 CANT1Q8WVQ1 401 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 SORCS1Q8WY21 1168 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 GLMNQ92990 594 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 GLYATL1Q969I3 302 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 METTL2AQ96IZ6 378 aaKnown RBP11.67□□□□□ -0.54
USP6NL-206ENST00000609853 DPY30Q9C005 99 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 ACTL8Q9H568 366 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 ELOVL6Q9H5J4 265 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 OBP2AQ9NY56 170 aa11.67□□□□□ -0.54
USP6NL-206ENST00000609853 EDDM13A0A1B0GTR0 161 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 C9JVG2 144 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 TXNDC9O14530 226 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 FFAR3O14843 346 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 PER2O15055 1255 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 ARPC2O15144 300 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 GPR42O15529 346 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 SGTAO43765 313 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 SEC22BO75396 215 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 PSIP1O75475 530 aaKnown RBP11.66□□□□□ -0.54
USP6NL-206ENST00000609853 KCNH1O95259 989 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 EPORP19235 508 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 FASP25445 335 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 ITGB7P26010 798 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 PRLHRP49683 370 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 PCDH1Q08174 1060 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 KIAA0040Q15053 153 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 PTCHD3Q3KNS1 767 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 ZNF697Q5TEC3 545 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 LIPJQ5W064 366 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 NLRP8Q86W28 1048 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 KLHDC8AQ8IYD2 350 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 ITFG1Q8TB96 612 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 BPIFB1Q8TDL5 484 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 SLC13A3Q8WWT9 602 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 LRTOMTQ8WZ04 291 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 OR8D1Q8WZ84 308 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 TMEM159Q96B96 161 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 PPWD1Q96BP3 646 aaKnown RBP11.66□□□□□ -0.54
USP6NL-206ENST00000609853 AP2M1Q96CW1 435 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 CMTM7Q96FZ5 175 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 ZNF597Q96LX8 424 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 CCDC138Q96M89 665 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 CGREF1Q99674 301 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 CCM2Q9BSQ5 444 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 OSBPL11Q9BXB4 747 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 OSBPL6Q9BZF3 934 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 ZCCHC2Q9C0B9 1178 aaKnown RBP11.66□□□□□ -0.54
USP6NL-206ENST00000609853 ABCG8Q9H221 673 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 DEC1Q9P2X7 70 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 MAGEL2Q9UJ55 1249 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 CNOT6Q9ULM6 557 aaKnown RBP11.66□□□□□ -0.54
USP6NL-206ENST00000609853 PCDHB3Q9Y5E6 796 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 KCNE1BA0A087WTH5 132 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 ZNF839A8K0R7 811 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms