RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 VSIG1Q86XK7 387 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 MAML2Q8IZL2 1156 aaPredicted RBP4□□□□□ -1.77
SMCHD1-213ENST00000609587 CAMKVQ8NCB2 501 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 KIF18AQ8NI77 898 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 SYN2Q92777 582 aaPredicted RBP4□□□□□ -1.77
SMCHD1-213ENST00000609587 SIPA1Q96FS4 1042 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 LMLNQ96KR4 655 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 FER1L6-AS2Q96M78 137 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 ZNF558Q96NG5 402 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 MYADMQ96S97 322 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 TRMT61BQ9BVS5 477 aaKnown RBP4□□□□□ -1.77
SMCHD1-213ENST00000609587 PELI2Q9HAT8 420 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 PFDN4Q9NQP4 134 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 FAM118AQ9NWS6 357 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 B3GAT1Q9P2W7 334 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 ABT1Q9ULW3 272 aaKnown RBP4□□□□□ -1.77
SMCHD1-213ENST00000609587 SLC7A7Q9UM01 511 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 SOS1Q07889 1333 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 A0A1W2PPQ1 181 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 OR6C76A6NM76 312 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 E9PI62 339 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 GAPDHSO14556 408 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 FGF17O60258 216 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 PRKNO60260 465 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 WDPCPO95876 746 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 OR52Z1P0C646 297 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 FDPSP14324 419 aaKnown RBP3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 PTAFRP25105 342 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 MPZP25189 248 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 HSPA4P34932 840 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 NR2C2P49116 596 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 PDX1P52945 283 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 LIMK1P53667 647 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 DLX5P56178 289 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 PRKCZQ05513 592 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 DMPKQ09013 629 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 HYAL4Q2M3T9 481 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 FAM76BQ5HYJ3 339 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 CCNYL2Q5T2Q4 361 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 ARMC3Q5W041 872 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 PRR27Q6MZM9 219 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 MFSD12Q6NUT3 480 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 CORO6Q6QEF8 472 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 ANO5Q75V66 913 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 ERN2Q76MJ5 926 aaKnown RBP3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 TMPRSS11BQ86T26 416 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 PLD3Q8IV08 490 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 CIARTQ8N365 385 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 TRIML1Q8N9V2 468 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 OR2T12Q8NG77 320 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 OR13J1Q8NGT2 312 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 CCDC107Q8WV48 283 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 SSMEM1Q8WWF3 244 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 ROBO4Q8WZ75 1007 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 ALG14Q96F25 216 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 STAMBPL1Q96FJ0 436 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 ZNF354BQ96LW1 612 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 RAB3IPQ96QF0 476 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 EPYCQ99645 322 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 FAM129AQ9BZQ8 928 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 ARRDC1-AS1Q9H2J1 176 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 Q9N2K0 584 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 MYNNQ9NPC7 610 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 SERINC1Q9NRX5 453 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 ZFP57Q9NU63 452 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 KCNG2Q9UJ96 466 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 CPSF3Q9UKF6 684 aaKnown RBP3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 RNF150Q9ULK6 438 aa3.99□□□□□ -1.77
SMCHD1-213ENST00000609587 NEMP2A6NFY4 417 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 IFITM10A6NMD0 228 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 PTGESO14684 152 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 ATP5BP06576 529 aaKnown RBP3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 SMIM18P0DKX4 95 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 FGF5P12034 268 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 GNAZP19086 355 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 AZGP1P25311 298 aaKnown RBP3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 PTPN3P26045 913 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 MAPK12P53778 367 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 CDH11P55287 796 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 TFCP2Q12800 502 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 RBBP5Q15291 538 aaKnown RBP3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 SYT14P1Q58G82 188 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 ELFN2Q5R3F8 820 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 IL27RAQ6UWB1 636 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 FAM47EQ6ZV65 393 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 ADCK2Q7Z695 626 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 ZNF554Q86TJ5 538 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 FOXP4Q8IVH2 680 aaPredicted RBP3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 LMNTD1Q8N9Z9 388 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 OR1J1Q8NGS3 322 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 FGFBP3Q8TAT2 258 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 IRGQQ8WZA9 623 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 MOB3AQ96BX8 217 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 DHX58Q96C10 678 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 SPATA17Q96L03 361 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 PSD2Q9BQI7 771 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 RTP3Q9BQQ7 232 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 EDEM3Q9BZQ6 932 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 LRWD1Q9UFC0 647 aa3.98□□□□□ -1.77
SMCHD1-213ENST00000609587 MTUS1Q9ULD2 1270 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms