RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 ASF1AQ9Y294 204 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 TDRKHQ9Y2W6 561 aaKnown RBP12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 SPTBN1Q01082 2364 aaKnown RBP12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 SPENQ96T58 3664 aaKnown RBP12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 PRRC2CQ9Y520 2896 aaKnown RBP12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 GOLGA6L9A6NEM1 432 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 OR51F1A6NGY5 319 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 BTNL10A8MVZ5 291 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 PSMD3O43242 534 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 ZNF189O75820 626 aaPredicted RBP12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 KLF7O75840 302 aaPredicted RBP12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 OR2B3O76000 313 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 PTMAP06454 111 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 ACADLP28330 430 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 OTX2P32243 289 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 SHMT2P34897 504 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 NSG1P42857 185 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 GABRA4P48169 554 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 RAPSNQ13702 412 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 SSPNQ14714 243 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 ZIC1Q15915 447 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 EIF2S3LQ2VIR3 472 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 DEFB110Q30KQ9 67 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 PRR30Q53SZ7 412 aaPredicted RBP12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 C1orf189Q5VU69 101 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 SLC6A19Q695T7 634 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 RAB43Q86YS6 212 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 HPS6Q86YV9 775 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 TMTC1Q8IUR5 882 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 TBC1D21Q8IYX1 336 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 TAB3Q8N5C8 712 aaPredicted RBP12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 C19orf47Q8N9M1 422 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 TTC13Q8NBP0 860 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 PANX2Q96RD6 677 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 SMAD5Q99717 465 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 DHRS4Q9BTZ2 278 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 MAP10Q9P2G4 905 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 AMFRQ9UKV5 643 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 PADI2Q9Y2J8 665 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 REXO2Q9Y3B8 237 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 PCSK5Q92824 1860 aa12.93□□□□□ -0.34
POLR2J3-219ENST00000608621 SLC5A10A0PJK1 596 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 GRID2IPA4D2P6 1211 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 MROH6A6NGR9 719 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 TCP11X1B4DZS4 312 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 BHMG1C9JSJ3 638 aaPredicted RBP12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 H3BMH7 237 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 QSOX1O00391 747 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 SEMA7AO75326 666 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 IPO7O95373 1038 aaKnown RBP12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 AP2A1O95782 977 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 FTH1P02794 183 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 CTSBP07858 339 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 CHRM5P08912 532 aaPredicted RBP12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 PSMA3P25788 255 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 MSNP26038 577 aaKnown RBP12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 GDF10P55107 478 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 ITIH4Q14624 930 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 KYNUQ16719 465 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 CCDC38Q502W7 563 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 RHBDD2Q6NTF9 364 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 RAD9BQ6WBX8 426 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 LRRC57Q8N9N7 239 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 FLVCR1-AS1Q8TAF5 88 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 SSC4DQ8WTU2 575 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 TMEM121Q9BTD3 319 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 DHCR7Q9UBM7 475 aaKnown RBP12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 PLEKHB1Q9UF11 243 aaPredicted RBP12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 POLG2Q9UHN1 485 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 GPN3Q9UHW5 284 aaPredicted RBP12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 PLAGL1Q9UM63 463 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 PACSIN2Q9UNF0 486 aaPredicted RBP12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 PTRH2Q9Y3E5 179 aaKnown RBP12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 AP1M2Q9Y6Q5 423 aa12.92□□□□□ -0.34
POLR2J3-219ENST00000608621 A0A0J9YY10 115 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 CCDC162PA2VCL2 907 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 ISM1B1AKI9 464 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 OR56A5P0C7T3 313 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 FOXN2P32314 431 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 DCDP81605 110 aaKnown RBP12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 MRPL49Q13405 166 aaKnown RBP12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 PLEKHN1Q494U1 663 aaPredicted RBP12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 PEX26Q7Z412 305 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 DNAJC22Q8N4W6 341 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 ZNF655Q8N720 491 aaPredicted RBP12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 ACRBPQ8NEB7 543 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 OR52K1Q8NGK4 314 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 OR5K2Q8NHB8 316 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 PNPLA2Q96AD5 504 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 C19orf60Q96EN9 201 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 IP6K3Q96PC2 410 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 GBP5Q96PP8 586 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 C17orf62Q9BQA9 187 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 CHRNA10Q9GZZ6 450 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 CASS4Q9NQ75 786 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 OR6C2Q9NZP2 312 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 C5AR2Q9P296 337 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 IFT80Q9P2H3 777 aaPredicted RBP12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 IMPACTQ9P2X3 320 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 CDYLQ9Y232 598 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms